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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7484408   pentatricopeptide repeat-containing protein At4g38010 
 ppo-r.4   7484408   pentatricopeptide repeat-containing protein At4g38010 
 ppo-m.4   7484408   pentatricopeptide repeat-containing protein At4g38010 
 mtr-u.5   11424766   pentatricopeptide repeat-containing protein At4g38010 
 ath-u.5   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 vvi-u.5   100243207   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 vvi-u.5   100265770   pentatricopeptide repeat-containing protein At4g38010 
 osa-u.5   4336227   pentatricopeptide repeat-containing protein At4g38010 

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Top 50 coexpressed genes to 7484408 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7484408 (ppo-u.5 coexpression data)

CoexMap"7484408"


ppoLOC7484408 | Entrez gene ID : 7484408    
Species ppo mtr ath vvi osa hvu sot tae nta bra cit gma zma ghi bdi sly bna sbi cre
Paralog 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002318245.3 [sequence] [blastp]
XP_024437789.1 [sequence] [blastp]
XP_024437791.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  mito 1  (predict for XP_002318245.3)
cyto 6,  nucl 2,  mito 1  (predict for XP_024437789.1)
cyto 6,  nucl 2,  mito 1  (predict for XP_024437791.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for XP_002318245.3)
mito 7,  other 4  (predict for XP_024437789.1)
mito 7,  other 4  (predict for XP_024437791.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7484408

.
ppo-r.4
for
7484408

.
ppo-m.4
for
7484408

.
mtr-u.5
for
11424766

.
ath-u.5
for
AT4G38010

.
vvi-u.5
for
100243207

.
vvi-u.5
for
100265770

.
osa-u.5
for
4336227

.


Ortholog ID: 12223
Species ath osa vvi vvi ppo mtr hvu bna bna sot nta nta
Symbol AT4G38010 LOC4336227 LOC100243207 LOC100265770 LOC7484408 LOC11424766 LOC123427073 LOC125596730 LOC106393211 LOC102596345 LOC107796900 LOC107832250
Function* Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At4g38010-like pentatricopeptide repeat-containing protein At4g38010-like pentatricopeptide repeat-containing protein At4g38010-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829957 4336227 100243207 100265770 7484408 11424766 123427073 125596730 106393211 102596345 107796900 107832250
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