Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100265770   pentatricopeptide repeat-containing protein At4g38010 
 vvi-r.5   100265770   pentatricopeptide repeat-containing protein At4g38010 
 vvi-u.5   100243207   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ath-u.5   AT4G38010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ppo-u.5   7484408   pentatricopeptide repeat-containing protein At4g38010 
 mtr-u.5   11424766   pentatricopeptide repeat-containing protein At4g38010 
 bna-r.1   125596730   pentatricopeptide repeat-containing protein At4g38010-like 
 bna-r.1   106393211   pentatricopeptide repeat-containing protein At4g38010-like 
 bna-r.1   106388894   pentatricopeptide repeat-containing protein At4g38010 
 sot-r.1   102596345   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 nta-r.1   107832250   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 nta-r.1   107796900   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 osa-u.5   4336227   pentatricopeptide repeat-containing protein At4g38010 
 hvu-r.1   123427073   pentatricopeptide repeat-containing protein At4g38010-like 

close


Top 50 coexpressed genes to 100265770 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100265770 (vvi-u.5 coexpression data)

CoexMap"100265770"


vviLOC100265770 | Entrez gene ID : 100265770      
Species vvi ath ppo mtr bna sot nta osa hvu gma bra zma cre ghi sbi sly cit tae bdi
Paralog 3 1 1 1 3 1 2 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_059589628.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 2,  cyto_nucl 2,  chlo_mito 2,  chlo 1,  mito 1,  plas 1,  vacu 1  (predict for XP_059589628.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_059589628.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100265770
vvi-r.5
for
100265770
vvi-u.5
for
100243207
ath-u.5
for
AT4G38010
ppo-u.5
for
7484408
mtr-u.5
for
11424766
bna-r.1
for
125596730
bna-r.1
for
106393211
bna-r.1
for
106388894
sot-r.1
for
102596345
nta-r.1
for
107832250
nta-r.1
for
107796900
osa-u.5
for
4336227
hvu-r.1
for
123427073


Ortholog ID: 12223
Species vvi vvi ath ppo mtr bna bna bna sot nta nta osa hvu
Symbol LOC100265770 LOC100243207 AT4G38010 LOC7484408 LOC11424766 LOC125596730 LOC106393211 LOC106388894 LOC102596345 LOC107832250 LOC107796900 LOC4336227 LOC123427073
Function* pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At1g08070, chloroplastic Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At4g38010-like pentatricopeptide repeat-containing protein At4g38010-like pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At4g38010 pentatricopeptide repeat-containing protein At4g38010-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100265770 100243207 829957 7484408 11424766 125596730 106393211 106388894 102596345 107832250 107796900 4336227 123427073
The preparation time of this page was 0.1 [sec].