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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   RR14   response regulator 14 
 ath-u.5   RR14   response regulator 14 
 ath-m.9   RR14   response regulator 14 
 ath-e.2   RR14   response regulator 14 
 ath-m.4.bio   RR14   response regulator 14 
 ath-m.4.hor   RR14   response regulator 14 
 ath-m.4.lig   RR14   response regulator 14 
 ath-m.4.str   RR14   response regulator 14 
 ath-m.4.tis   RR14   response regulator 14 
 bra-r.6   103854042   two-component response regulator ARR14 
 bna-r.1   106432945   two-component response regulator ARR14 
 bna-r.1   125581974   two-component response regulator ARR14-like 
 ghi-r.1   107910344   two-component response regulator ORR21 
 ghi-r.1   107909872   two-component response regulator ORR21 
 cit-r.1   102606615   two-component response regulator ORR21 
 gma-u.5   100817125   two-component response regulator ORR21 
 gma-u.5   100804937   two-component response regulator ORR21 
 vvi-u.5   100250832   two-component response regulator ORR21 
 ppo-u.5   7459182   two-component response regulator ORR21 
 ppo-u.5   7457808   two-component response regulator ORR21 
 mtr-u.5   25482558   two-component response regulator ORR21 
 sly-u.5   101264510   two-component response regulator ARR14 
 sot-r.1   102606335   two-component response regulator ARR14 
 nta-r.1   107805246   two-component response regulator ORR21 
 nta-r.1   107814899   two-component response regulator ORR21-like 
 osa-u.5   4332111   two-component response regulator ORR21-like 
 zma-u.5   541636   response regulator 8 
 zma-u.5   541639   response regulator 10 
 tae-r.2   123085123   two-component response regulator ORR21 
 tae-r.2   123092914   two-component response regulator ORR21 
 tae-r.2   100873111   two-component response regulator ORR21 
 hvu-r.1   123449267   two-component response regulator ORR21-like 
 sbi-r.1   8056866   two-component response regulator ORR21 
 bdi-r.1   100821963   two-component response regulator ORR21 

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Top 50 coexpressed genes to RR14 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RR14 (ath-r.7 coexpression data)

CoexMap"814707"


athRR14 | Entrez gene ID : 814707      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (66 genes)  IEA TAS  
GO:0000160 [list] [network] phosphorelay signal transduction system  (87 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0000156 [list] [network] phosphorelay response regulator activity  (33 genes)  ISS  
GO:0042802 [list] [network] identical protein binding  (414 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001324401.1 [sequence] [blastp]
NP_001324402.1 [sequence] [blastp]
NP_178285.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  vacu 1,  chlo_mito 1  (predict for NP_001324401.1)
chlo 2,  E.R. 2,  nucl 1,  vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_001324402.1)
nucl 5,  chlo 1,  cyto 1,  mito 1,  cysk 1,  golg 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_178285.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001324401.1)
other 8  (predict for NP_001324402.1)
other 8  (predict for NP_178285.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
RR14
ath-u.5
for
RR14
ath-m.9
for
RR14
ath-e.2
for
RR14
ath-m.4.bio
for
RR14
ath-m.4.hor
for
RR14
ath-m.4.lig
for
RR14
ath-m.4.str
for
RR14
ath-m.4.tis
for
RR14
bra-r.6
for
103854042
bna-r.1
for
106432945
bna-r.1
for
125581974
ghi-r.1
for
107910344
ghi-r.1
for
107909872
cit-r.1
for
102606615
gma-u.5
for
100817125
gma-u.5
for
100804937
vvi-u.5
for
100250832
ppo-u.5
for
7459182
ppo-u.5
for
7457808
mtr-u.5
for
25482558
sly-u.5
for
101264510
sot-r.1
for
102606335
nta-r.1
for
107805246
nta-r.1
for
107814899
osa-u.5
for
4332111
zma-u.5
for
541636
zma-u.5
for
541639
tae-r.2
for
123085123
tae-r.2
for
123092914
tae-r.2
for
100873111
hvu-r.1
for
123449267
sbi-r.1
for
8056866
bdi-r.1
for
100821963


Ortholog ID: 9371
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol RR14 LOC103854042 LOC106432945 LOC125581974 LOC107910344 LOC107909872 LOC102606615 LOC100817125 LOC100804937 LOC100250832 LOC7459182 LOC7457808 LOC25482558 LOC101264510 LOC102606335 LOC107805246 LOC107814899 LOC4332111 LOC541636 LOC541639 LOC123085123 LOC123092914 LOC100873111 LOC123449267 LOC8056866 LOC100821963
Function* response regulator 14 two-component response regulator ARR14 two-component response regulator ARR14 two-component response regulator ARR14-like two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ARR14 two-component response regulator ARR14 two-component response regulator ORR21 two-component response regulator ORR21-like two-component response regulator ORR21-like response regulator 8 response regulator 10 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21 two-component response regulator ORR21-like two-component response regulator ORR21 two-component response regulator ORR21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 7
gma04075 Plant hormone signal transduction 2
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly01200 Carbon metabolism 3
sly00620 Pyruvate metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04075 Plant hormone signal transduction 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04075 Plant hormone signal transduction 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 5
tae04142 Lysosome 5
tae04145 Phagosome 5
tae04075 Plant hormone signal transduction 3
tae00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 8
tae04142 Lysosome 8
tae04145 Phagosome 8
tae00562 Inositol phosphate metabolism 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 8
tae04142 Lysosome 8
tae04145 Phagosome 8
tae00562 Inositol phosphate metabolism 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814707 103854042 106432945 125581974 107910344 107909872 102606615 100817125 100804937 100250832 7459182 7457808 25482558 101264510 102606335 107805246 107814899 4332111 541636 541639 123085123 123092914 100873111 123449267 8056866 100821963
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