Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT2G39670   Radical SAM superfamily protein 
 ath-u.5   AT2G39670   Radical SAM superfamily protein 
 ath-m.9   AT2G39670   Radical SAM superfamily protein 
 ath-e.2   AT2G39670   Radical SAM superfamily protein 
 ath-m.4.bio   AT2G39670   Radical SAM superfamily protein 
 ath-m.4.hor   AT2G39670   Radical SAM superfamily protein 
 ath-m.4.lig   AT2G39670   Radical SAM superfamily protein 
 ath-m.4.str   AT2G39670   Radical SAM superfamily protein 
 ath-m.4.tis   AT2G39670   Radical SAM superfamily protein 
 bra-r.6   103867024   probable dual-specificity RNA methyltransferase RlmN 
 bna-r.1   106396811   probable dual-specificity RNA methyltransferase RlmN 
 bna-r.1   106451011   probable dual-specificity RNA methyltransferase RlmN 
 ghi-r.1   107904126   probable dual-specificity RNA methyltransferase RlmN 
 ghi-r.1   107897305   probable dual-specificity RNA methyltransferase RlmN 
 cit-r.1   102625760   uncharacterized LOC102625760 
 gma-u.5   100818638   probable dual-specificity RNA methyltransferase RlmN 
 gma-u.5   100801657   probable dual-specificity RNA methyltransferase RlmN 
 vvi-u.5   100241081   uncharacterized LOC100241081 
 ppo-u.5   7467549   uncharacterized LOC7467549 
 mtr-u.5   11427515   probable dual-specificity RNA methyltransferase RlmN 
 sly-u.5   101253790   uncharacterized LOC101253790 
 sot-r.1   102604953   probable dual-specificity RNA methyltransferase RlmN 
 nta-r.1   107814127   uncharacterized LOC107814127 
 nta-r.1   107810882   uncharacterized LOC107810882 
 osa-u.5   4326401   uncharacterized LOC4326401 
 zma-u.5   100193530   Radical SAM superfamily protein 
 tae-r.2   123081007   probable dual-specificity RNA methyltransferase RlmN 
 tae-r.2   123072851   probable dual-specificity RNA methyltransferase RlmN 
 tae-r.2   123063699   probable dual-specificity RNA methyltransferase RlmN 
 hvu-r.1   123445705   probable dual-specificity RNA methyltransferase RlmN 
 sbi-r.1   110433578   probable dual-specificity RNA methyltransferase RlmN 
 bdi-r.1   100833160   probable dual-specificity RNA methyltransferase RlmN 
 cre-r.1   CHLRE_01g043000v5   uncharacterized protein 

close


Top 50 coexpressed genes to AT2G39670 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT2G39670 (ath-r.7 coexpression data)

CoexMap"818550"


athAT2G39670 | Entrez gene ID : 818550      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030488 [list] [network] tRNA methylation  (9 genes)  IEA  
GO:0070475 [list] [network] rRNA base methylation  (10 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (43 genes)  IEA  
Protein NP_565909.1 [sequence] [blastp]
NP_850319.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_565909.1)
chlo 10  (predict for NP_850319.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_565909.1)
chlo 4  (predict for NP_850319.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT2G39670
ath-u.5
for
AT2G39670
ath-m.9
for
AT2G39670
ath-e.2
for
AT2G39670
ath-m.4.bio
for
AT2G39670
ath-m.4.hor
for
AT2G39670
ath-m.4.lig
for
AT2G39670
ath-m.4.str
for
AT2G39670
ath-m.4.tis
for
AT2G39670
bra-r.6
for
103867024
bna-r.1
for
106396811
bna-r.1
for
106451011
ghi-r.1
for
107904126
ghi-r.1
for
107897305
cit-r.1
for
102625760
gma-u.5
for
100818638
gma-u.5
for
100801657
vvi-u.5
for
100241081
ppo-u.5
for
7467549
mtr-u.5
for
11427515
sly-u.5
for
101253790
sot-r.1
for
102604953
nta-r.1
for
107814127
nta-r.1
for
107810882
osa-u.5
for
4326401
zma-u.5
for
100193530
tae-r.2
for
123081007
tae-r.2
for
123072851
tae-r.2
for
123063699
hvu-r.1
for
123445705
sbi-r.1
for
110433578
bdi-r.1
for
100833160
cre-r.1
for
CHLRE_01g043000v5


Ortholog ID: 10034
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT2G39670 LOC103867024 LOC106396811 LOC106451011 LOC107904126 LOC107897305 LOC102625760 LOC100818638 LOC100801657 LOC100241081 LOC7467549 LOC11427515 LOC101253790 LOC102604953 LOC107814127 LOC107810882 LOC4326401 LOC100193530 LOC123081007 LOC123072851 LOC123063699 LOC123445705 LOC110433578 LOC100833160 CHLRE_01g043000v5
Function* Radical SAM superfamily protein probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN uncharacterized LOC102625760 probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN uncharacterized LOC100241081 uncharacterized LOC7467549 probable dual-specificity RNA methyltransferase RlmN uncharacterized LOC101253790 probable dual-specificity RNA methyltransferase RlmN uncharacterized LOC107814127 uncharacterized LOC107810882 uncharacterized LOC4326401 Radical SAM superfamily protein probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 2
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818550 103867024 106396811 106451011 107904126 107897305 102625760 100818638 100801657 100241081 7467549 11427515 101253790 102604953 107814127 107810882 4326401 100193530 123081007 123072851 123063699 123445705 110433578 100833160 5715606
The preparation time of this page was 0.1 [sec].