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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   RPL24   Translation protein SH3-like family protein 
 ath-u.5   RPL24   Translation protein SH3-like family protein 
 ath-m.9   RPL24   Translation protein SH3-like family protein 
 ath-e.2   RPL24   Translation protein SH3-like family protein 
 ath-m.4.bio   RPL24   Translation protein SH3-like family protein 
 ath-m.4.hor   RPL24   Translation protein SH3-like family protein 
 ath-m.4.lig   RPL24   Translation protein SH3-like family protein 
 ath-m.4.str   RPL24   Translation protein SH3-like family protein 
 ath-m.4.tis   RPL24   Translation protein SH3-like family protein 
 bra-r.6   103851950   50S ribosomal protein L24, chloroplastic 
 bra-r.6   103844915   50S ribosomal protein L24, chloroplastic 
 bna-r.1   106441622   50S ribosomal protein L24, chloroplastic-like 
 bna-r.1   106423179   50S ribosomal protein L24, chloroplastic 
 bna-r.1   106390090   50S ribosomal protein L24, chloroplastic-like 
 ghi-r.1   107942266   50S ribosomal protein L24, chloroplastic 
 ghi-r.1   107917786   50S ribosomal protein L24, chloroplastic 
 cit-r.1   102608232   50S ribosomal protein L24, chloroplastic 
 gma-u.5   100500009   putative 50S ribosomal protein L24 
 gma-u.5   100306643   uncharacterized LOC100306643 
 vvi-u.5   100250357   50S ribosomal protein L24, chloroplastic-like 
 ppo-u.5   18095878   50S ribosomal protein L24, chloroplastic 
 mtr-u.5   11407117   50S ribosomal protein L24, chloroplastic 
 sly-u.5   101261433   large ribosomal subunit protein uL24c 
 sot-r.1   102582481   50S ribosomal protein L24, chloroplastic-like 
 sot-r.1   102605576   50S ribosomal protein L24, chloroplastic 
 nta-r.1   107762137   50S ribosomal protein L24, chloroplastic 
 nta-r.1   107770861   large ribosomal subunit protein uL24c-like 
 nta-r.1   107800556   large ribosomal subunit protein uL24c-like 
 osa-u.5   4341869   50S ribosomal protein L24, chloroplastic 
 zma-u.5   100273201   50S ribosomal protein L24, chloroplastic-like 
 tae-r.2   123148951   50S ribosomal protein L24, chloroplastic 
 tae-r.2   123156051   50S ribosomal protein L24, chloroplastic 
 tae-r.2   123164951   50S ribosomal protein L24, chloroplastic 
 hvu-r.1   123407735   50S ribosomal protein L24, chloroplastic 
 sbi-r.1   8083304   50S ribosomal protein L24, chloroplastic 
 bdi-r.1   100821284   50S ribosomal protein L24, chloroplastic 
 cre-r.1   CHLRE_16g652550v5   uncharacterized protein 

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Top 50 coexpressed genes to RPL24 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RPL24 (ath-r.7 coexpression data)

CoexMap"835549"


athRPL24 | Entrez gene ID : 835549      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 1 1 2 3 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0032544 [list] [network] plastid translation  (20 genes)  IMP  
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA IMP  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (75 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_200271.2 [sequence] [blastp]
NP_851190.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_200271.2)
chlo 9  (predict for NP_851190.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_200271.2)
chlo 9  (predict for NP_851190.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
RPL24
ath-u.5
for
RPL24
ath-m.9
for
RPL24
ath-e.2
for
RPL24
ath-m.4.bio
for
RPL24
ath-m.4.hor
for
RPL24
ath-m.4.lig
for
RPL24
ath-m.4.str
for
RPL24
ath-m.4.tis
for
RPL24
bra-r.6
for
103851950
bra-r.6
for
103844915
bna-r.1
for
106441622
bna-r.1
for
106423179
bna-r.1
for
106390090
ghi-r.1
for
107942266
ghi-r.1
for
107917786
cit-r.1
for
102608232
gma-u.5
for
100500009
gma-u.5
for
100306643
vvi-u.5
for
100250357
ppo-u.5
for
18095878
mtr-u.5
for
11407117
sly-u.5
for
101261433
sot-r.1
for
102582481
sot-r.1
for
102605576
nta-r.1
for
107762137
nta-r.1
for
107770861
nta-r.1
for
107800556
osa-u.5
for
4341869
zma-u.5
for
100273201
tae-r.2
for
123148951
tae-r.2
for
123156051
tae-r.2
for
123164951
hvu-r.1
for
123407735
sbi-r.1
for
8083304
bdi-r.1
for
100821284
cre-r.1
for
CHLRE_16g652550v5


Ortholog ID: 6376
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol RPL24 LOC103851950 LOC103844915 LOC106423179 LOC106390090 LOC125592876 LOC107942266 LOC107917786 LOC102608232 LOC100500009 LOC100306643 LOC100250357 LOC18095878 LOC11407117 LOC101261433 LOC102582481 LOC102605576 LOC107762137 LOC107800556 LOC107771799 LOC4341869 LOC100273201 LOC123148951 LOC123156051 LOC123164951 LOC123407735 LOC8083304 LOC100821284 CHLRE_16g652550v5
Function* Translation protein SH3-like family protein 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic putative 50S ribosomal protein L24 uncharacterized LOC100306643 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic large ribosomal subunit protein uL24c 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic large ribosomal subunit protein uL24c-like large ribosomal subunit protein uL24c-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic-like 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic 50S ribosomal protein L24, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta03060 Protein export 2
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 8
cre01240 Biosynthesis of cofactors 3
cre00230 Purine metabolism 2
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835549 103851950 103844915 106423179 106390090 125592876 107942266 107917786 102608232 100500009 100306643 100250357 18095878 11407117 101261433 102582481 102605576 107762137 107800556 107771799 4341869 100273201 123148951 123156051 123164951 123407735 8083304 100821284 5723779
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