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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   THFS   10-formyltetrahydrofolate synthetase 
 ath-u.5   THFS   10-formyltetrahydrofolate synthetase 
 ath-e.2   THFS   10-formyltetrahydrofolate synthetase 
 bra-r.6   103871345   formate--tetrahydrofolate ligase 
 bra-r.6   103868620   formate--tetrahydrofolate ligase 
 bna-r.1   125608916   formate--tetrahydrofolate ligase-like 
 bna-r.1   125610100   formate--tetrahydrofolate ligase-like 
 bna-r.1   106405654   formate--tetrahydrofolate ligase 
 ghi-r.1   107939256   formate--tetrahydrofolate ligase 
 ghi-r.1   107936203   formate--tetrahydrofolate ligase 
 cit-r.1   102616080   formate--tetrahydrofolate ligase 
 gma-u.5   100806844   formate--tetrahydrofolate ligase 
 gma-u.5   100782213   formate--tetrahydrofolate ligase 
 vvi-u.5   100255218   formate--tetrahydrofolate ligase 
 ppo-u.5   7455752   formate--tetrahydrofolate ligase 
 ppo-u.5   7463602   formate--tetrahydrofolate ligase 
 mtr-u.5   11428805   formate--tetrahydrofolate ligase 
 sly-u.5   101265950   formate--tetrahydrofolate ligase 
 sot-r.1   102587729   formate--tetrahydrofolate ligase 
 nta-r.1   107830687   formate--tetrahydrofolate ligase 
 nta-r.1   107808503   formate--tetrahydrofolate ligase 
 osa-u.5   4347204   formate--tetrahydrofolate ligase 
 zma-u.5   541944   formate--tetrahydrofolate ligase 
 tae-r.2   123103922   formate--tetrahydrofolate ligase 
 tae-r.2   123112155   formate--tetrahydrofolate ligase 
 tae-r.2   123121658   formate--tetrahydrofolate ligase 
 hvu-r.1   123398418   formate--tetrahydrofolate ligase 
 sbi-r.1   8081018   formate--tetrahydrofolate ligase 
 bdi-r.1   100821958   formate--tetrahydrofolate ligase 
 cre-r.1   CHLRE_13g566000v5   uncharacterized protein 

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Top 50 coexpressed genes to THFS (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to THFS (ath-r.7 coexpression data)

CoexMap"841470"


athTHFS | Entrez gene ID : 841470      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00670 [list] [network] One carbon pool by folate (42 genes)
ath01200 [list] [network] Carbon metabolism (275 genes)
ath01240 [list] [network] Biosynthesis of cofactors (237 genes)
GO BP
GO CC
GO:0048046 [list] [network] apoplast  (340 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0004329 [list] [network] formate-tetrahydrofolate ligase activity  (3 genes)  IEA  
GO:0005507 [list] [network] copper ion binding  (134 genes)  HDA  
Protein NP_564571.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  mito 1,  nucl 1,  plas 1,  cyto_mito 1,  nucl_plas 1  (predict for NP_564571.1)
Subcellular
localization
TargetP
other 6,  scret 4  (predict for NP_564571.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
THFS
ath-u.5
for
THFS
ath-e.2
for
THFS
bra-r.6
for
103871345
bra-r.6
for
103868620
bna-r.1
for
125608916
bna-r.1
for
125610100
bna-r.1
for
106405654
ghi-r.1
for
107939256
ghi-r.1
for
107936203
cit-r.1
for
102616080
gma-u.5
for
100806844
gma-u.5
for
100782213
vvi-u.5
for
100255218
ppo-u.5
for
7455752
ppo-u.5
for
7463602
mtr-u.5
for
11428805
sly-u.5
for
101265950
sot-r.1
for
102587729
nta-r.1
for
107830687
nta-r.1
for
107808503
osa-u.5
for
4347204
zma-u.5
for
541944
tae-r.2
for
123103922
tae-r.2
for
123112155
tae-r.2
for
123121658
hvu-r.1
for
123398418
sbi-r.1
for
8081018
bdi-r.1
for
100821958
cre-r.1
for
CHLRE_13g566000v5


Ortholog ID: 8282
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol THFS LOC103871345 LOC103868620 LOC125610100 LOC106405654 LOC106368826 LOC107939256 LOC107936203 LOC102616080 LOC100806844 LOC100782213 LOC100255218 LOC7455752 LOC7463602 LOC11428805 LOC101265950 LOC102587729 LOC107830687 LOC107808503 LOC4347204 LOC541944 LOC123103922 LOC123112155 LOC123121658 LOC123398418 LOC8081018 LOC100821958 CHLRE_13g566000v5
Function* 10-formyltetrahydrofolate synthetase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase-like formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath00020 Citrate cycle (TCA cycle) 3
ath00480 Glutathione metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra01240 Biosynthesis of cofactors 3
bra00670 One carbon pool by folate 3
bra00920 Sulfur metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra01240 Biosynthesis of cofactors 3
bra00670 One carbon pool by folate 3
bra00270 Cysteine and methionine metabolism 2
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00670 One carbon pool by folate 4
bna01200 Carbon metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00670 One carbon pool by folate 4
bna01200 Carbon metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00670 One carbon pool by folate 4
bna01200 Carbon metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 2
ghi00670 One carbon pool by folate 2
ghi01200 Carbon metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 2
ghi00670 One carbon pool by folate 2
ghi01200 Carbon metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00670 One carbon pool by folate 3
gma01240 Biosynthesis of cofactors 3
gma01230 Biosynthesis of amino acids 3
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 4
gma00670 One carbon pool by folate 3
gma01200 Carbon metabolism 3
gma01240 Biosynthesis of cofactors 3
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00620 Pyruvate metabolism 3
vvi00710 Carbon fixation by Calvin cycle 2
vvi00061 Fatty acid biosynthesis 2
vvi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo01240 Biosynthesis of cofactors 3
ppo00670 One carbon pool by folate 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00053 Ascorbate and aldarate metabolism 3
ppo00260 Glycine, serine and threonine metabolism 2
ppo00670 One carbon pool by folate 2
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00592 alpha-Linolenic acid metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01210 2-Oxocarboxylic acid metabolism 7
sly01230 Biosynthesis of amino acids 7
sly01200 Carbon metabolism 5
sly00020 Citrate cycle (TCA cycle) 3
sly00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00920 Sulfur metabolism 5
sot00270 Cysteine and methionine metabolism 4
sot01320 Sulfur cycle 4
sot01200 Carbon metabolism 4
sot01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 6
nta00020 Citrate cycle (TCA cycle) 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 7
nta01230 Biosynthesis of amino acids 5
nta00020 Citrate cycle (TCA cycle) 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 8
osa01200 Carbon metabolism 5
osa00010 Glycolysis / Gluconeogenesis 3
osa01210 2-Oxocarboxylic acid metabolism 3
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00190 Oxidative phosphorylation 6
zma00030 Pentose phosphate pathway 4
zma00010 Glycolysis / Gluconeogenesis 3
zma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae01240 Biosynthesis of cofactors 4
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae01240 Biosynthesis of cofactors 5
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae00670 One carbon pool by folate 4
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 6
hvu01240 Biosynthesis of cofactors 4
hvu01230 Biosynthesis of amino acids 4
hvu01210 2-Oxocarboxylic acid metabolism 4
hvu00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
sbi03015 mRNA surveillance pathway 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 7
cre00061 Fatty acid biosynthesis 4
cre01212 Fatty acid metabolism 4
cre00620 Pyruvate metabolism 4
cre00640 Propanoate metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841470 103871345 103868620 125610100 106405654 106368826 107939256 107936203 102616080 100806844 100782213 100255218 7455752 7463602 11428805 101265950 102587729 107830687 107808503 4347204 541944 123103922 123112155 123121658 123398418 8081018 100821958 5719052
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