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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   100137001   MADS-box transcription factor 8 
 tae-r.2   542969   MADS-box transcription factor 8 
 tae-r.2   780637   MADS-box transcription factor 7 
 tae-r.2   123156477   MADS-box transcription factor 7 
 bdi-r.1   100844294   MADS-box transcription factor 7-like 
 bdi-r.1   100843405   MADS-box transcription factor 8 
 osa-u.5   4346134   MADS-box transcription factor 7-like 
 osa-u.5   4347517   MADS-box transcription factor 8-like 
 zma-u.5   100415938   uncharacterized LOC100415938 
 zma-u.5   542506   MADS27 
 sbi-r.1   8058971   MADS-box transcription factor 8 
 sbi-r.1   8060611   MADS-box transcription factor 7 
 ath-u.5   SEP1   K-box region and MADS-box transcription factor family protein 
 ath-u.5   SEP3   K-box region and MADS-box transcription factor family protein 
 ath-u.5   SEP2   K-box region and MADS-box transcription factor family protein 
 gma-u.5   100786066   agamous-like MADS-box protein MADS2 
 gma-u.5   100794429   agamous-like MADS-box protein MADS4 
 gma-u.5   100785322   agamous-like MADS-box protein MADS2 
 bra-r.6   103856162   developmental protein SEPALLATA 1 
 bra-r.6   103846385   developmental protein SEPALLATA 1 
 vvi-u.5   100251943   agamous-like MADS-box protein MADS2 
 vvi-u.5   100232936   agamous-like MADS-box protein MADS2 
 vvi-u.5   MADS2   MADS-box protein 2 
 ghi-r.1   107909691   agamous-like MADS-box protein MADS2 
 ghi-r.1   107899219   agamous-like MADS-box protein MADS2 
 ghi-r.1   107893809   agamous-like MADS-box protein MADS2 
 bna-r.1   106433239   developmental protein SEPALLATA 1 
 bna-r.1   111198100   developmental protein SEPALLATA 3 
 bna-r.1   125580827   developmental protein SEPALLATA 2-like 
 cit-r.1   102618932   agamous-like MADS-box protein AGL9 homolog 
 cit-r.1   102611482   agamous-like MADS-box protein MADS2 
 cit-r.1   102620094   agamous-like MADS-box protein MADS2 
 nta-r.1   107797730   agamous-like MADS-box protein MADS2 
 nta-r.1   107816782   MADS-box protein 04g005320-like 

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Top 50 coexpressed genes to 100137001 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100137001 (tae-r.2 coexpression data)

CoexMap"100137001"


taeLOC100137001 | Entrez gene ID : 100137001    
Species tae bdi osa zma sbi ath gma bra vvi ghi bna cit nta sot sly ppo cre mtr hvu
Paralog 4 2 2 2 2 3 3 2 3 3 3 3 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (367 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (700 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (2051 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3484 genes)  IEA  
Protein XP_044389540.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044389540.1)
Subcellular
localization
TargetP
other 7,  mito 5  (predict for XP_044389540.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
100137001
tae-r.2
for
542969
tae-r.2
for
780637
tae-r.2
for
123156477
bdi-r.1
for
100844294
bdi-r.1
for
100843405
osa-u.5
for
4346134
osa-u.5
for
4347517
zma-u.5
for
100415938
zma-u.5
for
542506
sbi-r.1
for
8058971
sbi-r.1
for
8060611
ath-u.5
for
SEP1
ath-u.5
for
SEP3
ath-u.5
for
SEP2
gma-u.5
for
100786066
gma-u.5
for
100794429
gma-u.5
for
100785322
bra-r.6
for
103856162
bra-r.6
for
103846385
vvi-u.5
for
100251943
vvi-u.5
for
100232936
vvi-u.5
for
MADS2
ghi-r.1
for
107909691
ghi-r.1
for
107899219
ghi-r.1
for
107893809
bna-r.1
for
106433239
bna-r.1
for
111198100
bna-r.1
for
125580827
cit-r.1
for
102618932
cit-r.1
for
102611482
cit-r.1
for
102620094
nta-r.1
for
107797730
nta-r.1
for
107816782


Ortholog ID: 747
Species tae tae tae bdi bdi osa osa zma zma sbi sbi ath ath ath gma gma gma sly bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit cit nta nta nta
Symbol LOC100137001 LOC780637 LOC123104312 LOC100844294 LOC100843405 LOC4346134 LOC4347517 LOC542506 LOC542043 LOC8058971 LOC8060611 SEP1 SEP3 SEP2 LOC100794429 LOC100811049 MADS28 TM29 LOC103856162 LOC103839053 LOC103835412 LOC100251943 MADS2 MADS4 LOC107909691 LOC107893809 LOC107886377 LOC125580827 LOC106425408 LOC106382868 LOC102618932 LOC102611482 LOC102620094 LOC107820803 LOC107773468 LOC142181159
Function* MADS-box transcription factor 8 MADS-box transcription factor 7 MADS-box transcription factor 8 MADS-box transcription factor 7-like MADS-box transcription factor 8 MADS-box transcription factor 7-like MADS-box transcription factor 8-like MADS27 MADS6 MADS-box transcription factor 8 MADS-box transcription factor 7 K-box region and MADS-box transcription factor family protein K-box region and MADS-box transcription factor family protein K-box region and MADS-box transcription factor family protein agamous-like MADS-box protein MADS4 agamous-like MADS-box protein MADS2 MADS transcription factor developmental protein SEPALLATA 1-like developmental protein SEPALLATA 1 agamous-like MADS-box protein AGL9 homolog agamous-like MADS-box protein AGL9 homolog agamous-like MADS-box protein MADS2 MADS-box protein 2 MADS-box protein 4 agamous-like MADS-box protein MADS2 agamous-like MADS-box protein MADS2 agamous-like MADS-box protein AGL9 homolog developmental protein SEPALLATA 2-like agamous-like MADS-box protein AGL9 homolog developmental protein SEPALLATA 2 agamous-like MADS-box protein AGL9 homolog agamous-like MADS-box protein MADS2 agamous-like MADS-box protein MADS2 MADS-box protein 04g005320 agamous-like MADS-box protein AGL9 homolog agamous-like MADS-box protein AGL9 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
bdi00100 Steroid biosynthesis 2
bdi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00620 Pyruvate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04082 Neuroactive ligand signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04820 Cytoskeleton in muscle cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100137001 780637 123104312 100844294 100843405 4346134 4347517 542506 542043 8058971 8060611 831436 839040 821151 100794429 100811049 547686 543770 103856162 103839053 103835412 100251943 100232867 100232869 107909691 107893809 107886377 125580827 106425408 106382868 102618932 102611482 102620094 107820803 107773468 142181159
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