ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100191743	uncharacterized LOC100191743
zma-r.6	100191743	uncharacterized LOC100191743
osa-u.5	4326466	thylakoid lumenal 17.9 kDa protein, chloroplastic
ath-u.5	AT4G24930	thylakoid lumenal 17.9 kDa protein, chloroplast
gma-u.5	100817380	thylakoid lumenal 17.9 kDa protein, chloroplastic
gma-u.5	100785278	thylakoid lumenal 17.9 kDa protein, chloroplastic
sly-u.5	101248362	thylakoid lumenal 17.9 kDa protein, chloroplastic
vvi-u.5	100262841	thylakoid lumenal 17.9 kDa protein, chloroplastic
ppo-u.5	7454726	thylakoid lumenal 17.9 kDa protein, chloroplastic
mtr-u.5	11428170	thylakoid lumenal 17.9 kDa protein, chloroplastic

functional annotation

KEGG

GO BP

GO CC

GO:0009543 [list] [network] chloroplast thylakoid lumen

(8 genes)

IEA

GO MF

Protein

NP_001130643.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 10

(predict for NP_001130643.1)

Subcellular
localization
TargetP

chlo 8, other 3

(predict for NP_001130643.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100191743	zma-r.6 for 100191743	osa-u.5 for 4326466	ath-u.5 for AT4G24930	gma-u.5 for 100817380	gma-u.5 for 100785278	sly-u.5 for 101248362	vvi-u.5 for 100262841	ppo-u.5 for 7454726	mtr-u.5 for 11428170

Ortholog ID: 10219

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100191743

thylakoid lumenal 17.9 kDa protein, chloroplastic

thylakoid lumenal 17.9 kDa protein, chloroplast

thylakoid lumenal 17.9 kDa protein, chloroplastic

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00630	Glyoxylate and dicarboxylate metabolism	3
osa01200	Carbon metabolism	3
osa04146	Peroxisome	2
osa00260	Glycine, serine and threonine metabolism	2
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00196	Photosynthesis - antenna proteins	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	3
bdi00195	Photosynthesis	2
bdi00630	Glyoxylate and dicarboxylate metabolism	2
bdi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	5
ath00260	Glycine, serine and threonine metabolism	2
ath00630	Glyoxylate and dicarboxylate metabolism	2
ath00670	One carbon pool by folate	2
ath00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	5
gma00860	Porphyrin metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	5
ghi00051	Fructose and mannose metabolism	4
ghi00030	Pentose phosphate pathway	3
ghi01200	Carbon metabolism	3
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00860	Porphyrin metabolism	2
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	6
bna01232	Nucleotide metabolism	6
bna01200	Carbon metabolism	6
bna00030	Pentose phosphate pathway	4
bna00710	Carbon fixation by Calvin cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna01200	Carbon metabolism	6
bna00240	Pyrimidine metabolism	5
bna01232	Nucleotide metabolism	5
bna00030	Pentose phosphate pathway	4
bna00710	Carbon fixation by Calvin cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	3
cit00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	8
nta00900	Terpenoid backbone biosynthesis	4
nta00730	Thiamine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	3
nta00630	Glyoxylate and dicarboxylate metabolism	2
nta00650	Butanoate metabolism	2
nta00860	Porphyrin metabolism	2
nta00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03060	Protein export	2
cre04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

100191743

8072373

4326466

123064857

123077214

123439394

100835505

828595

100785278

100817380

101248362

103862715

100262841

7454726

11428170

107924275

107912084

106442426

106374384

102597968

102617934

107775352

107823581

5725948

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100191743 (zma-u.5 coexpression data)

Top 50 enrichment test to 100191743 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	2	1	1	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100191743 (zma-u.5 coexpression data)

Top 50 enrichment test to 100191743 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**