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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100785278   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 gma-r.7   100785278   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 gma-u.5   100817380   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 mtr-u.5   11428170   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 ppo-u.5   7454726   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 ath-u.5   AT4G24930   thylakoid lumenal 17.9 kDa protein, chloroplast 
 bra-r.6   103862715   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 vvi-u.5   100262841   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 ghi-r.1   107912084   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 ghi-r.1   107924275   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 bna-r.1   106374384   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 bna-r.1   106442426   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 cit-r.1   102617934   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 sly-u.5   101248362   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 sot-r.1   102597968   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 nta-r.1   107823581   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 nta-r.1   107775352   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 osa-u.5   4326466   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 zma-u.5   100191743   uncharacterized LOC100191743 
 tae-r.2   123064857   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 tae-r.2   123060208   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 tae-r.2   123077214   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 hvu-r.1   123439394   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 sbi-r.1   8072373   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 bdi-r.1   100835505   thylakoid lumenal 17.9 kDa protein, chloroplastic 
 cre-r.1   CHLRE_17g714900v5   uncharacterized protein 

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Top 50 coexpressed genes to 100785278 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100785278 (gma-u.5 coexpression data)

CoexMap"100785278"


gmaLOC100785278 | Entrez gene ID : 100785278      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (11 genes)  IEA  
GO MF
Protein XP_003523151.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_003523151.1)
Subcellular
localization
TargetP
chlo 6,  other 3  (predict for XP_003523151.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100785278
gma-r.7
for
100785278
gma-u.5
for
100817380
mtr-u.5
for
11428170
ppo-u.5
for
7454726
ath-u.5
for
AT4G24930
bra-r.6
for
103862715
vvi-u.5
for
100262841
ghi-r.1
for
107912084
ghi-r.1
for
107924275
bna-r.1
for
106374384
bna-r.1
for
106442426
cit-r.1
for
102617934
sly-u.5
for
101248362
sot-r.1
for
102597968
nta-r.1
for
107823581
nta-r.1
for
107775352
osa-u.5
for
4326466
zma-u.5
for
100191743
tae-r.2
for
123064857
tae-r.2
for
123060208
tae-r.2
for
123077214
hvu-r.1
for
123439394
sbi-r.1
for
8072373
bdi-r.1
for
100835505
cre-r.1
for
CHLRE_17g714900v5


Ortholog ID: 10219
Species gma gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100785278 LOC100817380 LOC11428170 LOC7454726 AT4G24930 LOC103862715 LOC100262841 LOC107912084 LOC107924275 LOC106374384 LOC106442426 LOC102617934 LOC101248362 LOC102597968 LOC107823581 LOC107775352 LOC4326466 LOC100191743 LOC123064857 LOC123060208 LOC123077214 LOC123439394 LOC8072373 LOC100835505 CHLRE_17g714900v5
Function* thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplast thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic uncharacterized LOC100191743 thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic thylakoid lumenal 17.9 kDa protein, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 5
gma00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00670 One carbon pool by folate 2
ath00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 5
ghi00051 Fructose and mannose metabolism 4
ghi00030 Pentose phosphate pathway 3
ghi01200 Carbon metabolism 3
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 6
bna00240 Pyrimidine metabolism 5
bna01232 Nucleotide metabolism 5
bna00030 Pentose phosphate pathway 4
bna00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 6
bna01232 Nucleotide metabolism 6
bna01200 Carbon metabolism 6
bna00030 Pentose phosphate pathway 4
bna00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 3
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00650 Butanoate metabolism 2
nta00860 Porphyrin metabolism 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00900 Terpenoid backbone biosynthesis 4
nta00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 3
osa01200 Carbon metabolism 3
osa04146 Peroxisome 2
osa00260 Glycine, serine and threonine metabolism 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00195 Photosynthesis 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03060 Protein export 2
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100785278 100817380 11428170 7454726 828595 103862715 100262841 107912084 107924275 106374384 106442426 102617934 101248362 102597968 107823581 107775352 4326466 100191743 123064857 123060208 123077214 123439394 8072373 100835505 5725948
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