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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100192588   uncharacterized LOC100192588 
 zma-r.6   100192588   uncharacterized LOC100192588 
 zma-m.5   100192588   uncharacterized LOC100192588 
 sbi-r.1   8083760   FHA domain-containing protein DDL 
 osa-u.5   4339499   FHA domain-containing protein DDL 
 tae-r.2   123139978   FHA domain-containing protein DDL 
 tae-r.2   123129084   FHA domain-containing protein DDL 
 tae-r.2   123146253   FHA domain-containing protein DDL 
 hvu-r.1   123401608   FHA domain-containing protein DDL 
 bdi-r.1   100836499   FHA domain-containing protein DDL 
 ath-u.5   DDL   SMAD/FHA domain-containing protein 
 gma-u.5   100812104   FHA domain-containing protein DDL 
 gma-u.5   100780414   FHA domain-containing protein DDL 
 sly-u.5   101248430   FHA domain-containing protein 
 bra-r.6   103859863   FHA domain-containing protein DDL 
 vvi-u.5   100267032   FHA domain-containing protein DDL 
 ppo-u.5   18095934   FHA domain-containing protein DDL 
 ppo-u.5   7454424   FHA domain-containing protein DDL 
 mtr-u.5   11441498   FHA domain-containing protein DDL 
 mtr-u.5   11406068   FHA domain-containing protein DDL 
 ghi-r.1   107893531   FHA domain-containing protein DDL 
 ghi-r.1   107920563   FHA domain-containing protein DDL 
 bna-r.1   106389277   FHA domain-containing protein DDL 
 bna-r.1   106424448   FHA domain-containing protein DDL 
 sot-r.1   102589137   FHA domain-containing protein DDL 
 cit-r.1   102613644   FHA domain-containing protein DDL 
 nta-r.1   107783579   uncharacterized LOC107783579 
 nta-r.1   107781120   uncharacterized LOC107781120 
 cre-r.1   CHLRE_09g390430v5   uncharacterized protein 

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Top 50 coexpressed genes to 100192588 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100192588 (zma-u.5 coexpression data)

CoexMap"100192588"


zmaLOC100192588 | Entrez gene ID : 100192588      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 2 1 1 1 2 2 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03040 [list] [network] Spliceosome (506 genes)
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001348591.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001348591.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001348591.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100192588
zma-r.6
for
100192588
zma-m.5
for
100192588
sbi-r.1
for
8083760
osa-u.5
for
4339499
tae-r.2
for
123139978
tae-r.2
for
123129084
tae-r.2
for
123146253
hvu-r.1
for
123401608
bdi-r.1
for
100836499
ath-u.5
for
DDL
gma-u.5
for
100812104
gma-u.5
for
100780414
sly-u.5
for
101248430
bra-r.6
for
103859863
vvi-u.5
for
100267032
ppo-u.5
for
18095934
ppo-u.5
for
7454424
mtr-u.5
for
11441498
mtr-u.5
for
11406068
ghi-r.1
for
107893531
ghi-r.1
for
107920563
bna-r.1
for
106389277
bna-r.1
for
106424448
sot-r.1
for
102589137
cit-r.1
for
102613644
nta-r.1
for
107783579
nta-r.1
for
107781120
cre-r.1
for
CHLRE_09g390430v5


Ortholog ID: 8475
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo ppo mtr mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100192588 LOC8083760 LOC4339499 LOC123139978 LOC123129084 LOC123146253 LOC123401608 LOC100836499 DDL LOC100812104 LOC100780414 LOC101248430 LOC103859863 LOC100267032 LOC18095934 LOC7454424 LOC11441498 LOC11406068 LOC107893531 LOC107920563 LOC106389277 LOC106424448 LOC102589137 LOC102613644 LOC107783579 LOC107781120 CHLRE_09g390430v5
Function* uncharacterized LOC100192588 FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL SMAD/FHA domain-containing protein FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL FHA domain-containing protein DDL uncharacterized LOC107783579 uncharacterized LOC107781120 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03250 Viral life cycle - HIV-1 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03013 Nucleocytoplasmic transport 2
bdi00514 Other types of O-glycan biosynthesis 2
bdi03022 Basal transcription factors 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma03010 Ribosome 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 3
gma00543 Exopolysaccharide biosynthesis 3
gma00920 Sulfur metabolism 3
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr01240 Biosynthesis of cofactors 3
mtr03040 Spliceosome 3
mtr00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100192588 8083760 4339499 123139978 123129084 123146253 123401608 100836499 821601 100812104 100780414 101248430 103859863 100267032 18095934 7454424 11441498 11406068 107893531 107920563 106389277 106424448 102589137 102613644 107783579 107781120 5720635
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