ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100193992	uncharacterized LOC100193992
zma-r.6	100193992	uncharacterized LOC100193992
zma-m.5	100193992	uncharacterized LOC100193992
zma-u.5	100284688	charged multivesicular body protein 2a
zma-u.5	103647208	vacuolar protein sorting-associated protein 2 homolog 1-like
osa-u.5	4342791	vacuolar protein sorting-associated protein 2 homolog 1
osa-u.5	4351205	vacuolar protein sorting-associated protein 2 homolog 1
ath-u.5	VPS2.1	SNF7 family protein
gma-u.5	100791887	vacuolar protein sorting-associated protein 2 homolog 1
gma-u.5	100526885	vacuolar protein sorting-associated protein
sly-u.5	101247586	SNF7 family protein
vvi-u.5	100255989	vacuolar protein sorting-associated protein 2 homolog 1
ppo-u.5	18107704	vacuolar protein sorting-associated protein 2 homolog 1
ppo-u.5	7478111	vacuolar protein sorting-associated protein 2 homolog 1
mtr-u.5	25500541	vacuolar protein sorting-associated protein 2 homolog 1
mtr-u.5	25486474	vacuolar protein sorting-associated protein 2 homolog 1

Annotation

functional annotation

KEGG

zma04144 [list] [network] Endocytosis (208 genes)

GO BP

GO:0007034 [list] [network] vacuolar transport

(74 genes)

IEA

GO CC

GO MF

Protein

NP_001132529.2 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo 2, cyto 2, plas 1, cyto_nucl 1

(predict for NP_001132529.2)

Subcellular
localization
TargetP

other 6, mito 6

(predict for NP_001132529.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100193992	zma-r.6 for 100193992	zma-m.5 for 100193992	zma-u.5 for 100284688	zma-u.5 for 103647208	osa-u.5 for 4342791	osa-u.5 for 4351205	ath-u.5 for VPS2.1	gma-u.5 for 100791887	gma-u.5 for 100526885	sly-u.5 for 101247586	vvi-u.5 for 100255989	ppo-u.5 for 18107704	ppo-u.5 for 7478111	mtr-u.5 for 25500541	mtr-u.5 for 25486474

Ortholog

Ortholog ID: 6485

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

VPS2.1

Function^*

charged multivesicular body protein 2a

uncharacterized LOC100193992

vacuolar protein sorting-associated protein 2 homolog 1

SNF7 family protein

vacuolar protein sorting-associated protein

SNF7 family protein

vacuolar protein sorting-associated protein 2 homolog 1

vacuolar protein sorting-associated protein 2 homolog 1-like

vacuolar protein sorting-associated protein 2 homolog 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3
zma04626	Plant-pathogen interaction	3
zma04144	Endocytosis	2
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	6
zma04144	Endocytosis	4
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	6
sbi03250	Viral life cycle - HIV-1	3
sbi03272	Virion - Hepatitis viruses	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	4
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	5
osa04145	Phagosome	3
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	5
osa03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	8
tae03250	Viral life cycle - HIV-1	3
tae03272	Virion - Hepatitis viruses	3
tae00561	Glycerolipid metabolism	3
tae00566	Sulfoquinovose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	8
tae03250	Viral life cycle - HIV-1	3
tae03272	Virion - Hepatitis viruses	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi04145	Phagosome	4
bdi04148	Efferocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04130	SNARE interactions in vesicular transport	3
bdi04144	Endocytosis	2
bdi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	5
ath04120	Ubiquitin mediated proteolysis	2
ath03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	3
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	6
vvi04626	Plant-pathogen interaction	2
vvi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo03250	Viral life cycle - HIV-1	2
ppo03272	Virion - Hepatitis viruses	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	8
ghi03272	Virion - Hepatitis viruses	4
ghi04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	12
ghi03272	Virion - Hepatitis viruses	4
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	16
bna04145	Phagosome	9
bna04148	Efferocytosis	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	16
bna04145	Phagosome	9
bna04148	Efferocytosis	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	8
nta03272	Virion - Hepatitis viruses	4
nta00440	Phosphonate and phosphinate metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	8
nta03272	Virion - Hepatitis viruses	4
nta00440	Phosphonate and phosphinate metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	6
cre03250	Viral life cycle - HIV-1	2
cre03272	Virion - Hepatitis viruses	2

Expression

Expression pattern

Entrez Gene ID^*

100284688

100193992

8086026

8069133

4342791

4351205

123091770

123086260

123448277

100840560

100821134

815211

100526885

101247586

103860351

100255989

18107704

7478111

25500541

25486474

107932231

107929946

106439778

106418627

102595344

102610845

107831976

107764456

5724208

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100193992 (zma-u.5 coexpression data)

Top 50 enrichment test to 100193992 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	2	1	2	1	1	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100193992 (zma-u.5 coexpression data)

Top 50 enrichment test to 100193992 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**