ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123086260	vacuolar protein sorting-associated protein 2 homolog 1
tae-r.2	123096805	vacuolar protein sorting-associated protein 2 homolog 1
tae-r.2	123091770	vacuolar protein sorting-associated protein 2 homolog 1
hvu-r.1	123448277	vacuolar protein sorting-associated protein 2 homolog 1
bdi-r.1	100840560	vacuolar protein sorting-associated protein 2 homolog 1
bdi-r.1	100821134	vacuolar protein sorting-associated protein 2 homolog 1
osa-u.5	4342791	vacuolar protein sorting-associated protein 2 homolog 1
osa-u.5	4351205	vacuolar protein sorting-associated protein 2 homolog 1
zma-u.5	103647208	vacuolar protein sorting-associated protein 2 homolog 1-like
zma-u.5	100193992	uncharacterized LOC100193992
zma-u.5	100284688	charged multivesicular body protein 2a
sbi-r.1	8086026	vacuolar protein sorting-associated protein 2 homolog 1
sbi-r.1	8069133	vacuolar protein sorting-associated protein 2 homolog 1
ath-u.5	VPS2.1	SNF7 family protein
gma-u.5	100791887	vacuolar protein sorting-associated protein 2 homolog 1
gma-u.5	100526885	vacuolar protein sorting-associated protein
sly-u.5	101247586	SNF7 family protein
bra-r.6	103860351	vacuolar protein sorting-associated protein 2 homolog 1
vvi-u.5	100255989	vacuolar protein sorting-associated protein 2 homolog 1
ppo-u.5	18107704	vacuolar protein sorting-associated protein 2 homolog 1
ppo-u.5	7478111	vacuolar protein sorting-associated protein 2 homolog 1
mtr-u.5	25500541	vacuolar protein sorting-associated protein 2 homolog 1
mtr-u.5	25486474	vacuolar protein sorting-associated protein 2 homolog 1
ghi-r.1	107932231	vacuolar protein sorting-associated protein 2 homolog 1
ghi-r.1	107929946	vacuolar protein sorting-associated protein 2 homolog 1
bna-r.1	106439778	vacuolar protein sorting-associated protein 2 homolog 1
bna-r.1	106418627	vacuolar protein sorting-associated protein 2 homolog 1-like
sot-r.1	102595344	vacuolar protein sorting-associated protein 2 homolog 1
cit-r.1	102610845	vacuolar protein sorting-associated protein 2 homolog 1
nta-r.1	107831976	vacuolar protein sorting-associated protein 2 homolog 1
nta-r.1	107764456	vacuolar protein sorting-associated protein 2 homolog 1
cre-r.1	CHLRE_04g213450v5	uncharacterized protein

Top 50 coexpressed genes to 123086260 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123086260 (tae-r.2 coexpression data)

CoexMap"123086260"

[Cytoscape]

Annotation

functional annotation

KEGG

taes04144 [list] [network] Endocytosis (447 genes)

GO BP

GO:0007034 [list] [network] vacuolar transport

(176 genes)

IEA

GO CC

GO MF

Protein

XP_044363908.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto_nucl 5, cyto 4, nucl 4, cysk_nucl 3, nucl_plas 3

(predict for XP_044363908.1)

Subcellular
localization
TargetP

other 9

(predict for XP_044363908.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123086260	tae-r.2 for 123096805	tae-r.2 for 123091770	hvu-r.1 for 123448277	bdi-r.1 for 100840560	bdi-r.1 for 100821134	osa-u.5 for 4342791	osa-u.5 for 4351205	zma-u.5 for 103647208	zma-u.5 for 100193992	zma-u.5 for 100284688	sbi-r.1 for 8086026	sbi-r.1 for 8069133	ath-u.5 for VPS2.1	gma-u.5 for 100791887	gma-u.5 for 100526885	sly-u.5 for 101247586	bra-r.6 for 103860351	vvi-u.5 for 100255989	ppo-u.5 for 18107704	ppo-u.5 for 7478111	mtr-u.5 for 25500541	mtr-u.5 for 25486474	ghi-r.1 for 107932231	ghi-r.1 for 107929946	bna-r.1 for 106439778	bna-r.1 for 106418627	sot-r.1 for 102595344	cit-r.1 for 102610845	nta-r.1 for 107831976	nta-r.1 for 107764456	cre-r.1 for CHLRE_04g213450v5

Ortholog

Ortholog ID: 6485

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

VPS2.1

Function^*