ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100194028	uncharacterized LOC100194028
zma-r.6	100194028	uncharacterized LOC100194028
zma-m.5	100194028	uncharacterized LOC100194028
zma-u.5	100282255	uncharacterized LOC100282255
osa-u.5	4349503	TOM1-like protein 1
osa-u.5	4330406	TOM1-like protein 1
ath-u.5	AT5G16880	Target of Myb protein 1
ath-u.5	AT1G06210	ENTH/VHS/GAT family protein
gma-u.5	100793134	TOM1-like protein 2-like
gma-u.5	100803803	TOM1-like protein 2
sly-u.5	101256571	TOM1-like protein 1
sly-u.5	101259571	ENTH/VHS/ANTH family protein
vvi-u.5	100263154	TOM1-like protein 2
vvi-u.5	100264036	TOM1-like protein 1
vvi-u.5	100251552	TOM1-like protein 2
ppo-u.5	18108295	TOM1-like protein 1
ppo-u.5	7454349	TOM1-like protein 2
ppo-u.5	7471966	TOM1-like protein 2
mtr-u.5	25499268	TOM1-like protein 2
mtr-u.5	11436153	TOM1-like protein 1
mtr-u.5	11446667	TOM1-like protein 1

Annotation

functional annotation

KEGG

GO BP

GO:0043328 [list] [network] protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway

(24 genes)

IEA

GO CC

GO MF

GO:0043130 [list] [network] ubiquitin binding	(72 genes)	IEA
GO:0035091 [list] [network] phosphatidylinositol binding	(92 genes)	IEA

Protein

NP_001132563.1 [sequence] [blastp]
XP_008676614.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, chlo 1, nucl 1, nucl_plas 1	(predict for NP_001132563.1)
cyto 7, chlo 1, nucl 1, nucl_plas 1	(predict for XP_008676614.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001132563.1)
other 8	(predict for XP_008676614.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100194028	zma-r.6 for 100194028	zma-m.5 for 100194028	zma-u.5 for 100282255	osa-u.5 for 4349503	osa-u.5 for 4330406	ath-u.5 for AT5G16880	ath-u.5 for AT1G06210	gma-u.5 for 100793134	gma-u.5 for 100803803	sly-u.5 for 101256571	sly-u.5 for 101259571	vvi-u.5 for 100263154	vvi-u.5 for 100264036	vvi-u.5 for 100251552	ppo-u.5 for 18108295	ppo-u.5 for 7454349	ppo-u.5 for 7471966	mtr-u.5 for 25499268	mtr-u.5 for 11436153	mtr-u.5 for 11446667

Ortholog

Ortholog ID: 1815

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100282255

uncharacterized LOC100194028

TOM1-like protein 2

TOM1-like protein 1

ENTH/VHS/GAT family protein

Target of Myb protein 1

TOM1-like protein 2

ENTH/VHS/ANTH family protein

TOM1-like protein 1

TOM1-like protein 2

TOM1-like protein 1

TOM1-like protein 2

TOM1-like protein 1

TOM1-like protein 2

TOM1-like protein 1

TOM1-like protein 2

TOM1-like protein 1

TOM1-like protein 2

TOM1-like protein 1

TOM1-like protein 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	2
zma04144	Endocytosis	2
zma04146	Peroxisome	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	2
sbi04144	Endocytosis	2
sbi00053	Ascorbate and aldarate metabolism	2
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa00240	Pyrimidine metabolism	2
osa01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	11
hvu00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	3
bdi04130	SNARE interactions in vesicular transport	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	3
bdi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00600	Sphingolipid metabolism	2
ath04148	Efferocytosis	2
ath04130	SNARE interactions in vesicular transport	2
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	4
sly04626	Plant-pathogen interaction	3
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03060	Protein export	2
bra04141	Protein processing in endoplasmic reticulum	2
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo03050	Proteasome	2
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00510	N-Glycan biosynthesis	2
ppo00513	Various types of N-glycan biosynthesis	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	5
mtr04016	MAPK signaling pathway - plant	4
mtr04070	Phosphatidylinositol signaling system	2
mtr04075	Plant hormone signal transduction	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi03040	Spliceosome	4
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	3
bna03272	Virion - Hepatitis viruses	3
bna04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2
cit03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta04141	Protein processing in endoplasmic reticulum	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	3
cre04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

100282255

100194028

110434565

110431928

4349503

4330406

123186944

123043082

123401762

123431487

100836153

100827235

837130

831551

100777747

101259571

101256571

103856222

100264036

100251552

7471966

18104195

11436153

25499268

107920152

107958647

106365703

125594928

102582067

102598068

102617088

102615038

107817777

107825217

5721107

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100194028 (zma-u.5 coexpression data)

Top 50 enrichment test to 100194028 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	2	2	2	2	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100194028 (zma-u.5 coexpression data)

Top 50 enrichment test to 100194028 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**