ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7471966	TOM1-like protein 2
ppo-r.4	7471966	TOM1-like protein 2
ppo-u.5	7454349	TOM1-like protein 2
ppo-u.5	18104195	TOM1-like protein 1
ppo-u.5	18108295	TOM1-like protein 1
gma-u.5	100793134	TOM1-like protein 2-like
gma-u.5	100803803	TOM1-like protein 2
mtr-u.5	11436153	TOM1-like protein 1
mtr-u.5	11446667	TOM1-like protein 1
mtr-u.5	25499268	TOM1-like protein 2
ath-u.5	AT5G16880	Target of Myb protein 1
ath-u.5	AT1G06210	ENTH/VHS/GAT family protein
vvi-u.5	100264036	TOM1-like protein 1
vvi-u.5	100251552	TOM1-like protein 2
vvi-u.5	100263154	TOM1-like protein 2
sly-u.5	101256571	TOM1-like protein 1
sly-u.5	101259571	ENTH/VHS/ANTH family protein
osa-u.5	4349503	TOM1-like protein 1
osa-u.5	4330406	TOM1-like protein 1
zma-u.5	100194028	uncharacterized LOC100194028
zma-u.5	100282255	uncharacterized LOC100282255

Annotation

functional annotation

KEGG

GO BP

GO:0043328 [list] [network] protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway

(22 genes)

IEA

GO CC

GO MF

GO:0043130 [list] [network] ubiquitin binding	(80 genes)	IEA
GO:0035091 [list] [network] phosphatidylinositol binding	(92 genes)	IEA

Protein

XP_002300774.3 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 3, cysk_nucl 3, nucl_plas 3

(predict for XP_002300774.3)

Subcellular
localization
TargetP

other 8

(predict for XP_002300774.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7471966 .	ppo-r.4 for 7471966 .	ppo-u.5 for 7454349 .	ppo-u.5 for 18104195 .	ppo-u.5 for 18108295 .	gma-u.5 for 100793134 .	gma-u.5 for 100803803 .	mtr-u.5 for 11436153 .	mtr-u.5 for 11446667 .	mtr-u.5 for 25499268 .	ath-u.5 for AT5G16880 .	ath-u.5 for AT1G06210 .	vvi-u.5 for 100264036 .	vvi-u.5 for 100251552 .	vvi-u.5 for 100263154 .	sly-u.5 for 101256571 .	sly-u.5 for 101259571 .	osa-u.5 for 4349503 .	osa-u.5 for 4330406 .	zma-u.5 for 100194028 .	zma-u.5 for 100282255 .

Ortholog

Ortholog ID: 1815

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

ENTH/VHS/GAT family protein

Target of Myb protein 1

TOM1-like protein 2

ENTH/VHS/ANTH family protein

TOM1-like protein 1

uncharacterized LOC100282255

uncharacterized LOC100194028

TOM1-like protein 1

TOM1-like protein 2

TOM1-like protein 1

TOM1-like protein 2

TOM1-like protein 1

TOM1-like protein 2

TOM1-like protein 1

uncharacterized protein

TOM1-like protein 2

TOM1-like protein 1

TOM1-like protein 2

TOM1-like protein 1

TOM1-like protein 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00600	Sphingolipid metabolism	2
ath04148	Efferocytosis	2
ath04130	SNARE interactions in vesicular transport	2
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	4
sly04626	Plant-pathogen interaction	3
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa00240	Pyrimidine metabolism	2
osa01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	2
zma04144	Endocytosis	2
zma04146	Peroxisome	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03060	Protein export	2
bra04141	Protein processing in endoplasmic reticulum	2
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo03050	Proteasome	2
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00510	N-Glycan biosynthesis	2
ppo00513	Various types of N-glycan biosynthesis	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	5
mtr04016	MAPK signaling pathway - plant	4
mtr04070	Phosphatidylinositol signaling system	2
mtr04075	Plant hormone signal transduction	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	11
hvu00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi03040	Spliceosome	4
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	3
bna03272	Virion - Hepatitis viruses	3
bna04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	3
cre04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	2
sbi04144	Endocytosis	2
sbi00053	Ascorbate and aldarate metabolism	2
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2
cit03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	3
bdi04130	SNARE interactions in vesicular transport	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	3
bdi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta04141	Protein processing in endoplasmic reticulum	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

837130

831551

100777747

101259571

101256571

4349503

4330406

100282255

100194028

103856222

100264036

100251552

7471966

18104195

11436153

25499268

123186944

123043082

123401762

123431487

107920152

107958647

106365703

125594928

5721107

110434565

110431928

102582067

102598068

102617088

102615038

100836153

100827235

107817777

107825217

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7471966 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7471966 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	sbi	nta	bra	cre	hvu	cit	bdi	sot	tae	bna	ghi
Paralog	5	2	3	2	3	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7471966 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7471966 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**