ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100194213	Rho GTPase-activating protein 3
zma-r.6	100194213	Rho GTPase-activating protein 3
zma-u.5	100279404	uncharacterized LOC100279404
zma-u.5	100282297	rac GTPase activating protein
zma-u.5	100284822	uncharacterized LOC100284822
sbi-r.1	8073216	rho GTPase-activating protein 5
sbi-r.1	8067224	rho GTPase-activating protein 2
sbi-r.1	8066986	rho GTPase-activating protein 5
osa-u.5	4324006	rho GTPase-activating protein 1
osa-u.5	4352405	rho GTPase-activating protein 2
osa-u.5	4330316	rho GTPase-activating protein 5
tae-r.2	123091496	rho GTPase-activating protein 4
tae-r.2	123086500	rho GTPase-activating protein 4
hvu-r.1	123397617	rho GTPase-activating protein 4-like
hvu-r.1	123402360	rho GTPase-activating protein 5-like
bdi-r.1	100842082	rho GTPase-activating protein 5
bdi-r.1	100839935	rho GTPase-activating protein 2
bdi-r.1	100826387	rho GTPase-activating protein 4
ath-u.5	ROPGAP3	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
ath-u.5	AT3G11490	rac GTPase activating protein
ath-u.5	AT4G03100	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
gma-u.5	121172725	rho GTPase-activating protein 5
gma-u.5	100807134	rho GTPase-activating protein 2
gma-u.5	100812700	rho GTPase-activating protein 2
sly-u.5	101263759	Rho GTPase activating protein 2
sly-u.5	101262176	rho GTPase-activating protein 5
sly-u.5	101263756	rho GTPase-activating protein 2
bra-r.6	103871580	rho GTPase-activating protein 5
bra-r.6	103845972	rho GTPase-activating protein 4
vvi-u.5	100258031	rho GTPase-activating protein 5
vvi-u.5	100252743	rho GTPase-activating protein 2
vvi-u.5	100245390	rho GTPase-activating protein 5
ppo-u.5	7465261	rho GTPase-activating protein 5
ppo-u.5	7491933	rho GTPase-activating protein 5
ppo-u.5	7497284	rho GTPase-activating protein 3
mtr-u.5	11410234	rho GTPase-activating protein 2
mtr-u.5	11430687	rho GTPase-activating protein 5
ghi-r.1	107933519	rho GTPase-activating protein 3
ghi-r.1	107928225	rho GTPase-activating protein 5
ghi-r.1	107924503	rho GTPase-activating protein 2
bna-r.1	111215948	rho GTPase-activating protein 4-like
bna-r.1	125608395	rho GTPase-activating protein 3-like
bna-r.1	106435734	rho GTPase-activating protein 4
sot-r.1	102604638	rho GTPase-activating protein 2-like
sot-r.1	102600997	rho GTPase-activating protein 5
sot-r.1	102594321	rho GTPase-activating protein 2-like
cit-r.1	102617500	rho GTPase-activating protein 4-like
cit-r.1	102622462	rho GTPase-activating protein 2
cit-r.1	102621050	rho GTPase-activating protein 5
nta-r.1	107812553	rho GTPase-activating protein 2-like
nta-r.1	107768544	rho GTPase-activating protein 2
nta-r.1	107761664	rho GTPase-activating protein 3

Top 50 coexpressed genes to 100194213 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100194213 (zma-u.5 coexpression data)

CoexMap"100194213"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0007165 [list] [network] signal transduction

(710 genes)

IEA

GO CC

GO MF

GO:0005096 [list] [network] GTPase activator activity

(92 genes)

IEA

Protein

NP_001346360.1 [sequence] [blastp]
XP_008667282.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 2, cyto 1, mito 1, cysk 1	(predict for NP_001346360.1)
chlo 6, nucl 2, cyto 1, cysk 1	(predict for XP_008667282.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001346360.1)
other 8	(predict for XP_008667282.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100194213	zma-r.6 for 100194213	zma-u.5 for 100279404	zma-u.5 for 100282297	zma-u.5 for 100284822	sbi-r.1 for 8073216	sbi-r.1 for 8067224	sbi-r.1 for 8066986	osa-u.5 for 4324006	osa-u.5 for 4352405	osa-u.5 for 4330316	tae-r.2 for 123091496	tae-r.2 for 123086500	hvu-r.1 for 123397617	hvu-r.1 for 123402360	bdi-r.1 for 100842082	bdi-r.1 for 100839935	bdi-r.1 for 100826387	ath-u.5 for ROPGAP3	ath-u.5 for AT3G11490	ath-u.5 for AT4G03100	gma-u.5 for 121172725	gma-u.5 for 100807134	gma-u.5 for 100812700	sly-u.5 for 101263759	sly-u.5 for 101262176	sly-u.5 for 101263756	bra-r.6 for 103871580	bra-r.6 for 103845972	vvi-u.5 for 100258031	vvi-u.5 for 100252743	vvi-u.5 for 100245390	ppo-u.5 for 7465261	ppo-u.5 for 7491933	ppo-u.5 for 7497284	mtr-u.5 for 11410234	mtr-u.5 for 11430687	ghi-r.1 for 107933519	ghi-r.1 for 107928225	ghi-r.1 for 107924503	bna-r.1 for 111215948	bna-r.1 for 125608395	bna-r.1 for 106435734	sot-r.1 for 102604638	sot-r.1 for 102600997	sot-r.1 for 102594321	cit-r.1 for 102617500	cit-r.1 for 102622462	cit-r.1 for 102621050	nta-r.1 for 107812553	nta-r.1 for 107768544	nta-r.1 for 107761664

Ortholog

Ortholog ID: 343

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

ROPGAP3

Function^*

uncharacterized LOC100279404

uncharacterized LOC100284449