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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100233127   protein TRANSPORT INHIBITOR RESPONSE 1 
 vvi-r.5   100233127   protein TRANSPORT INHIBITOR RESPONSE 1 
 vvi-u.5   100252378   protein AUXIN SIGNALING F-BOX 2 
 vvi-u.5   100264085   protein TRANSPORT INHIBITOR RESPONSE 1 
 ath-u.5   TIR1   F-box/RNI-like superfamily protein 
 ath-u.5   GRH1   GRR1-like protein 1 
 gma-u.5   TIR1D   protein TRANSPORT INHIBITOR RESPONSE 1D 
 gma-u.5   TIR1A   protein TRANSPORT INHIBITOR RESPONSE 1A 
 bra-r.6   103830378   protein TRANSPORT INHIBITOR RESPONSE 1 
 bra-r.6   103842104   protein TRANSPORT INHIBITOR RESPONSE 1 
 bra-r.6   103862757   protein TRANSPORT INHIBITOR RESPONSE 1 
 ppo-u.5   18111294   protein TRANSPORT INHIBITOR RESPONSE 1 
 ppo-u.5   7491325   protein TRANSPORT INHIBITOR RESPONSE 1 
 mtr-u.5   25484780   protein TRANSPORT INHIBITOR RESPONSE 1 
 ghi-r.1   107924496   protein TRANSPORT INHIBITOR RESPONSE 1 
 ghi-r.1   121220114   protein TRANSPORT INHIBITOR RESPONSE 1 
 ghi-r.1   107953203   protein TRANSPORT INHIBITOR RESPONSE 1 
 bna-r.1   106375233   protein TRANSPORT INHIBITOR RESPONSE 1 
 bna-r.1   106390402   protein TRANSPORT INHIBITOR RESPONSE 1 
 bna-r.1   106392292   GRR1-like protein 1 
 cit-r.1   102630854   protein TRANSPORT INHIBITOR RESPONSE 1 
 sly-u.5   100316892   TIR1-like protein 
 sot-r.1   107058008   protein TRANSPORT INHIBITOR RESPONSE 1-like 
 sot-r.1   102578728   protein TRANSPORT INHIBITOR RESPONSE 1-like 
 sot-r.1   102578999   protein TRANSPORT INHIBITOR RESPONSE 1 
 nta-r.1   107770213   protein TRANSPORT INHIBITOR RESPONSE 1 
 nta-r.1   107791833   protein TRANSPORT INHIBITOR RESPONSE 1 
 nta-r.1   107811573   protein TRANSPORT INHIBITOR RESPONSE 1 
 osa-u.5   4337827   transport inhibitor response 1-like protein Os05g0150500 
 zma-u.5   103635896   transport inhibitor response 1-like protein Os05g0150500 
 tae-r.2   123112721   transport inhibitor response 1-like protein Os05g0150500 
 tae-r.2   123180517   transport inhibitor response 1-like protein Os05g0150500 
 tae-r.2   123191327   transport inhibitor response 1-like protein Os05g0150500 
 hvu-r.1   123403296   transport inhibitor response 1-like protein Os11g0515500 
 hvu-r.1   123425454   transport inhibitor response 1-like protein Os05g0150500 
 sbi-r.1   8069501   transport inhibitor response 1-like protein Os05g0150500 
 bdi-r.1   100822026   transport inhibitor response 1-like protein Os05g0150500 

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Top 50 coexpressed genes to 100233127 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100233127 (vvi-u.5 coexpression data)

CoexMap"100233127"


vviLOC100233127 | Entrez gene ID : 100233127      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 2 1 3 3 1 1 3 3 1 1 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi04075 [list] [network] Plant hormone signal transduction (400 genes)
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (57 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (51 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002269127.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  cyto_nucl 4,  cyto 2  (predict for XP_002269127.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_002269127.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100233127
vvi-r.5
for
100233127
vvi-u.5
for
100252378
vvi-u.5
for
100264085
ath-u.5
for
TIR1
ath-u.5
for
GRH1
gma-u.5
for
TIR1D
gma-u.5
for
TIR1A
bra-r.6
for
103830378
bra-r.6
for
103842104
bra-r.6
for
103862757
ppo-u.5
for
18111294
ppo-u.5
for
7491325
mtr-u.5
for
25484780
ghi-r.1
for
107924496
ghi-r.1
for
121220114
ghi-r.1
for
107953203
bna-r.1
for
106375233
bna-r.1
for
106390402
bna-r.1
for
106392292
cit-r.1
for
102630854
sly-u.5
for
100316892
sot-r.1
for
107058008
sot-r.1
for
102578728
sot-r.1
for
102578999
nta-r.1
for
107770213
nta-r.1
for
107791833
nta-r.1
for
107811573
osa-u.5
for
4337827
zma-u.5
for
103635896
tae-r.2
for
123112721
tae-r.2
for
123180517
tae-r.2
for
123191327
hvu-r.1
for
123403296
hvu-r.1
for
123425454
sbi-r.1
for
8069501
bdi-r.1
for
100822026


Ortholog ID: 2659
Species vvi vvi vvi ath ath gma gma gma bra bra bra ppo ppo mtr ghi ghi ghi bna bna bna cit sly sot sot sot nta nta nta osa zma tae tae tae hvu hvu sbi bdi
Symbol LOC100233127 LOC100252378 LOC100264085 TIR1 GRH1 TIR1A TIR1B TIR1C LOC103830378 LOC103842104 LOC103858715 LOC18111294 LOC7491325 LOC25484780 LOC107924496 LOC121220114 LOC107949837 LOC111200796 LOC106413372 LOC106431491 LOC102630854 LOC100316892 LOC102578728 LOC102578999 LOC107058006 LOC107770213 LOC107791833 LOC107818988 LOC4337827 LOC103635896 LOC123112721 LOC123180517 LOC123191327 LOC123403296 LOC123425454 LOC8069501 LOC100822026
Function* protein TRANSPORT INHIBITOR RESPONSE 1 protein AUXIN SIGNALING F-BOX 2 protein TRANSPORT INHIBITOR RESPONSE 1 F-box/RNI-like superfamily protein GRR1-like protein 1 protein TRANSPORT INHIBITOR RESPONSE 1A protein TRANSPORT INHIBITOR RESPONSE 1B protein TRANSPORT INHIBITOR RESPONSE 1C protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 GRR1-like protein 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 GRR1-like protein 1 protein TRANSPORT INHIBITOR RESPONSE 1-like GRR1-like protein 1 protein TRANSPORT INHIBITOR RESPONSE 1 TIR1-like protein protein TRANSPORT INHIBITOR RESPONSE 1-like protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1-like protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 transport inhibitor response 1-like protein Os05g0150500 transport inhibitor response 1-like protein Os05g0150500 transport inhibitor response 1-like protein Os05g0150500 transport inhibitor response 1-like protein Os05g0150500 transport inhibitor response 1-like protein Os05g0150500 transport inhibitor response 1-like protein Os11g0515500 transport inhibitor response 1-like protein Os05g0150500 transport inhibitor response 1-like protein Os05g0150500 transport inhibitor response 1-like protein Os05g0150500
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta01240 Biosynthesis of cofactors 3
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta01240 Biosynthesis of cofactors 3
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae00230 Purine metabolism 3
tae00232 Caffeine metabolism 3
tae01232 Nucleotide metabolism 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae00310 Lysine degradation 5
tae00330 Arginine and proline metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04144 Endocytosis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03040 Spliceosome 2
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100233127 100252378 100264085 825473 828045 100809794 100779337 100779021 103830378 103842104 103858715 18111294 7491325 25484780 107924496 121220114 107949837 111200796 106413372 106431491 102630854 100316892 102578728 102578999 107058006 107770213 107791833 107818988 4337827 103635896 123112721 123180517 123191327 123403296 123425454 8069501 100822026
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