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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100240691   uncharacterized LOC100240691 
 zma-r.6   100240691   uncharacterized LOC100240691 
 zma-m.5   100240691   uncharacterized LOC100240691 
 zma-u.5   103645750   cysteine protease ATG4B-like 
 zma-u.5   103645145   cysteine protease ATG4B 
 sbi-r.1   110436280   cysteine protease ATG4B-like 
 osa-u.5   4333022   cysteine protease ATG4A-like 
 osa-u.5   4337435   cysteine protease ATG4B-like 
 tae-r.2   123055258   cysteine protease ATG4B 
 tae-r.2   100415827   cysteine protease ATG4B 
 tae-r.2   100415828   cysteine protease ATG4B 
 hvu-r.1   123428451   cysteine protease ATG4B-like 
 bdi-r.1   100829360   cysteine protease ATG4B 
 ath-u.5   AT2G44140   Peptidase family C54 protein 
 ath-u.5   AT3G59950   Peptidase family C54 protein 
 gma-u.5   100810317   cysteine protease ATG4 
 gma-u.5   100809664   cysteine protease ATG4 
 sly-u.5   101249673   cysteine protease ATG4 
 bra-r.6   103866769   cysteine protease ATG4a 
 bra-r.6   103862922   cysteine protease ATG4b 
 bra-r.6   103841848   cysteine protease ATG4b 
 vvi-u.5   100255545   cysteine protease ATG4 
 ppo-u.5   18106381   cysteine protease ATG4 
 ppo-u.5   7465597   cysteine protease ATG4 
 mtr-u.5   11436743   cysteine protease ATG4 
 ghi-r.1   107931271   cysteine protease ATG4 
 ghi-r.1   107930798   cysteine protease ATG4 
 bna-r.1   106445119   cysteine protease ATG4b 
 bna-r.1   106396820   cysteine protease ATG4b 
 bna-r.1   106396699   cysteine protease ATG4a-like 
 sot-r.1   102586842   cysteine protease ATG4-like 
 cit-r.1   102630051   cysteine protease ATG4 
 nta-r.1   107768603   cysteine protease ATG4-like 
 nta-r.1   107830682   cysteine protease ATG4 
 cre-r.1   CHLRE_12g510100v5   uncharacterized protein 

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Top 50 coexpressed genes to 100240691 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100240691 (zma-u.5 coexpression data)

CoexMap"100240691"


zmaLOC100240691 | Entrez gene ID : 100240691      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 1 2 3 1 1 2 2 1 3 1 2 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma04136 [list] [network] Autophagy - other (58 genes)
GO BP
GO:0035973 [list] [network] aggrephagy  (3 genes)  IEA  
GO:0051697 [list] [network] protein delipidation  (3 genes)  IEA  
GO:0006501 [list] [network] C-terminal protein lipidation  (6 genes)  IEA  
GO:0000423 [list] [network] mitophagy  (14 genes)  IEA  
GO:0034727 [list] [network] piecemeal microautophagy of the nucleus  (19 genes)  IEA  
GO:0000045 [list] [network] autophagosome assembly  (46 genes)  IEA  
GO:0016485 [list] [network] protein processing  (70 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
GO:0019786 [list] [network] protein-phosphatidylethanolamide deconjugating activity  (3 genes)  IEA  
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (26 genes)  IEA  
Protein NP_001137489.2 [sequence] [blastp]
XP_008661516.1 [sequence] [blastp]
XP_020400506.1 [sequence] [blastp]
XP_035818830.1 [sequence] [blastp]
XP_035818831.1 [sequence] [blastp]
XP_035818832.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  nucl_plas 3,  cyto_nucl 3  (predict for NP_001137489.2)
chlo 4,  nucl 4,  nucl_plas 3  (predict for XP_008661516.1)
chlo 4,  nucl 4,  nucl_plas 3  (predict for XP_020400506.1)
chlo 4,  nucl 4,  nucl_plas 3  (predict for XP_035818830.1)
nucl 4,  chlo 4,  nucl_plas 3,  cyto_nucl 3  (predict for XP_035818831.1)
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_035818832.1)
Subcellular
localization
TargetP
other 4,  chlo 4  (predict for NP_001137489.2)
other 6,  chlo 4  (predict for XP_008661516.1)
other 6,  chlo 4  (predict for XP_020400506.1)
other 6,  chlo 4  (predict for XP_035818830.1)
other 4,  chlo 4  (predict for XP_035818831.1)
chlo 6  (predict for XP_035818832.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100240691
zma-r.6
for
100240691
zma-m.5
for
100240691
zma-u.5
for
103645750
zma-u.5
for
103645145
sbi-r.1
for
110436280
osa-u.5
for
4333022
osa-u.5
for
4337435
tae-r.2
for
123055258
tae-r.2
for
100415827
tae-r.2
for
100415828
hvu-r.1
for
123428451
bdi-r.1
for
100829360
ath-u.5
for
AT2G44140
ath-u.5
for
AT3G59950
gma-u.5
for
100810317
gma-u.5
for
100809664
sly-u.5
for
101249673
bra-r.6
for
103866769
bra-r.6
for
103862922
bra-r.6
for
103841848
vvi-u.5
for
100255545
ppo-u.5
for
18106381
ppo-u.5
for
7465597
mtr-u.5
for
11436743
ghi-r.1
for
107931271
ghi-r.1
for
107930798
bna-r.1
for
106445119
bna-r.1
for
106396820
bna-r.1
for
106396699
sot-r.1
for
102586842
cit-r.1
for
102630051
nta-r.1
for
107768603
nta-r.1
for
107830682
cre-r.1
for
CHLRE_12g510100v5


Ortholog ID: 5976
Species zma zma zma sbi osa osa tae tae tae hvu bdi ath ath gma gma sly bra bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC100240691 LOC103645750 LOC103645145 LOC110436280 LOC4333022 LOC4337435 LOC123055258 LOC100415827 LOC100415828 LOC123428451 LOC100829360 AT2G44140 AT3G59950 LOC100810317 LOC100809664 LOC101249673 LOC103866769 LOC103862922 LOC103841848 LOC100255545 LOC18106381 LOC7465597 LOC11436743 LOC107931271 LOC107930798 LOC106445119 LOC106396699 LOC106396690 LOC102586842 LOC102630051 LOC107768603 LOC107830682 CHLRE_12g510100v5
Function* uncharacterized LOC100240691 cysteine protease ATG4B-like cysteine protease ATG4B cysteine protease ATG4B-like cysteine protease ATG4A-like cysteine protease ATG4B-like cysteine protease ATG4B cysteine protease ATG4B cysteine protease ATG4B cysteine protease ATG4B-like cysteine protease ATG4B Peptidase family C54 protein Peptidase family C54 protein cysteine protease ATG4 cysteine protease ATG4 cysteine protease ATG4 cysteine protease ATG4a cysteine protease ATG4b cysteine protease ATG4b cysteine protease ATG4 cysteine protease ATG4 cysteine protease ATG4 cysteine protease ATG4 cysteine protease ATG4 cysteine protease ATG4 cysteine protease ATG4b cysteine protease ATG4a-like cysteine protease ATG4a cysteine protease ATG4-like cysteine protease ATG4 cysteine protease ATG4-like cysteine protease ATG4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 3
tae00410 beta-Alanine metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
tae00600 Sphingolipid metabolism 3
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 3
tae00410 beta-Alanine metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04136 Autophagy - other 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
bra01200 Carbon metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo04120 Ubiquitin mediated proteolysis 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 5
bna04070 Phosphatidylinositol signaling system 5
bna04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04712 Circadian rhythm - plant 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100240691 103645750 103645145 110436280 4333022 4337435 123055258 100415827 100415828 123428451 100829360 819020 825165 100810317 100809664 101249673 103866769 103862922 103841848 100255545 18106381 7465597 11436743 107931271 107930798 106445119 106396699 106396690 102586842 102630051 107768603 107830682 5716557
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