ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100260940	synaptotagmin-2
vvi-u.5	100258229	synaptotagmin-3
ath-u.5	SYTA	synaptotagmin A
gma-u.5	100781189	synaptotagmin-2
gma-u.5	100778906	synaptotagmin-2
ppo-u.5	7453644	synaptotagmin-1
ppo-u.5	7463439	synaptotagmin-3
ppo-u.5	7472122	synaptotagmin-2
mtr-u.5	11414595	synaptotagmin-2
mtr-u.5	11422973	synaptotagmin-3
mtr-u.5	25492772	synaptotagmin-2
sly-u.5	101245487	synaptotagmin-3
sly-u.5	101249535	synaptotagmin-1
sly-u.5	101264564	synaptotagmin-1
osa-u.5	4347715	synaptotagmin-2
osa-u.5	9268561	synaptotagmin-2
osa-u.5	4341880	synaptotagmin-3
zma-u.5	103634452	synaptotagmin-1
zma-u.5	100285684	calcium lipid binding protein-like
zma-u.5	100192771	uncharacterized LOC100192771

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005783 [list] [network] endoplasmic reticulum

(421 genes)

IEA

GO MF

GO:0008289 [list] [network] lipid binding

(257 genes)

IEA

Protein

XP_002278341.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, plas 2, E.R. 2, E.R._plas 2

(predict for XP_002278341.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_002278341.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100260940	vvi-u.5 for 100258229	ath-u.5 for SYTA	gma-u.5 for 100781189	gma-u.5 for 100778906	ppo-u.5 for 7453644	ppo-u.5 for 7463439	ppo-u.5 for 7472122	mtr-u.5 for 11414595	mtr-u.5 for 11422973	mtr-u.5 for 25492772	sly-u.5 for 101245487	sly-u.5 for 101249535	sly-u.5 for 101264564	osa-u.5 for 4347715	osa-u.5 for 9268561	osa-u.5 for 4341880	zma-u.5 for 103634452	zma-u.5 for 100285684	zma-u.5 for 100192771

Ortholog

Ortholog ID: 864

Species

vvi

ath

gma

bra

ppo

mtr

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SYTC

Function^*

synaptotagmin-2

Calcium-dependent lipid-binding (CaLB domain) family protein

synaptotagmin-3

synaptotagmin-1

synaptotagmin-3

synaptotagmin-2

synaptotagmin-1

synaptotagmin-3

synaptotagmin-1

synaptotagmin-1-like

synaptotagmin-1

synaptotagmin-2

uncharacterized LOC100192771

synaptotagmin-1

synaptotagmin-3

synaptotagmin-2

synaptotagmin-2-like

synaptotagmin-3-like

synaptotagmin-1

synaptotagmin-2

synaptotagmin-3

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00564	Glycerophospholipid metabolism	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	2
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	4
gma00620	Pyruvate metabolism	4
gma01200	Carbon metabolism	4
gma00940	Phenylpropanoid biosynthesis	4
gma00061	Fatty acid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	4
cit01230	Biosynthesis of amino acids	4
cit00010	Glycolysis / Gluconeogenesis	3
cit00710	Carbon fixation by Calvin cycle	3
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	4
nta04141	Protein processing in endoplasmic reticulum	2
nta00904	Diterpenoid biosynthesis	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	2
tae00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	6
tae03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00410	beta-Alanine metabolism	2
hvu00640	Propanoate metabolism	2
hvu00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	6
hvu00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
hvu00260	Glycine, serine and threonine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	3
sbi04145	Phagosome	3
sbi04120	Ubiquitin mediated proteolysis	2
sbi04141	Protein processing in endoplasmic reticulum	2
sbi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

100260940

830301

100819310

103842562

103847319

7463439

25492772

11414595

106415118

106429454

102608152

101245487

101264564

102597682

107820292

4327448

4329259

100192771

103634452

123161154

123104610

123400167

123412720

8086287

8063320

100834146

100824473

5715641

5715642

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100260940 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100260940 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	1	2	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100260940 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100260940 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**