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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100241921   pentatricopeptide repeat-containing protein At2g41720 
 vvi-r.5   100241921   pentatricopeptide repeat-containing protein At2g41720 
 ath-u.5   EMB2654   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100814643   pentatricopeptide repeat-containing protein At2g41720 
 ppo-u.5   7473612   pentatricopeptide repeat-containing protein At2g41720 
 mtr-u.5   11418476   pentatricopeptide repeat-containing protein At2g41720 
 sly-u.5   101267511   pentatricopeptide repeat-containing protein At2g41720 
 osa-u.5   4342717   pentatricopeptide repeat-containing protein At2g41720 
 zma-u.5   100383403   uncharacterized LOC100383403 

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Top 50 coexpressed genes to 100241921 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100241921 (vvi-u.5 coexpression data)

CoexMap"100241921"


vviLOC100241921 | Entrez gene ID : 100241921      
Species vvi ath gma ppo mtr sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010653775.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 3,  nucl 2,  mito 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_010653775.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_010653775.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100241921
vvi-r.5
for
100241921
ath-u.5
for
EMB2654
gma-u.5
for
100814643
ppo-u.5
for
7473612
mtr-u.5
for
11418476
sly-u.5
for
101267511
osa-u.5
for
4342717
zma-u.5
for
100383403


Ortholog ID: 10711
Species vvi ath gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100241921 EMB2654 LOC100814643 LOC103866580 LOC7473612 LOC11418476 LOC107902254 LOC121227898 LOC106396458 LOC106450653 LOC102623809 LOC101267511 LOC102602503 LOC107800374 LOC107766839 LOC4342717 LOC100383403 LOC123188627 LOC123045037 LOC123426169 LOC8083906 LOC100829628
Function* pentatricopeptide repeat-containing protein At2g41720 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720-like pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 uncharacterized LOC100383403 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 5
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi00561 Glycerolipid metabolism 2
bdi00566 Sulfoquinovose metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100241921 818771 100814643 103866580 7473612 11418476 107902254 121227898 106396458 106450653 102623809 101267511 102602503 107800374 107766839 4342717 100383403 123188627 123045037 123426169 8083906 100829628
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