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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100829628   pentatricopeptide repeat-containing protein At2g41720 
 tae-r.2   123188627   pentatricopeptide repeat-containing protein At2g41720 
 tae-r.2   123052762   pentatricopeptide repeat-containing protein At2g41720 
 tae-r.2   123045037   pentatricopeptide repeat-containing protein At2g41720 
 hvu-r.1   123426169   pentatricopeptide repeat-containing protein At2g41720 
 osa-u.5   4342717   pentatricopeptide repeat-containing protein At2g41720 
 zma-u.5   100383403   uncharacterized LOC100383403 
 sbi-r.1   8083906   pentatricopeptide repeat-containing protein At2g41720 
 ath-u.5   EMB2654   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100814643   pentatricopeptide repeat-containing protein At2g41720 
 sly-u.5   101267511   pentatricopeptide repeat-containing protein At2g41720 
 bra-r.6   103866580   pentatricopeptide repeat-containing protein At2g41720 
 vvi-u.5   100241921   pentatricopeptide repeat-containing protein At2g41720 
 ppo-u.5   7473612   pentatricopeptide repeat-containing protein At2g41720 
 mtr-u.5   11418476   pentatricopeptide repeat-containing protein At2g41720 
 ghi-r.1   121227898   pentatricopeptide repeat-containing protein At2g41720-like 
 ghi-r.1   107948668   pentatricopeptide repeat-containing protein At2g41720 
 ghi-r.1   107902254   pentatricopeptide repeat-containing protein At2g41720 
 bna-r.1   106450653   pentatricopeptide repeat-containing protein At2g41720 
 bna-r.1   106396458   pentatricopeptide repeat-containing protein At2g41720 
 sot-r.1   102602503   pentatricopeptide repeat-containing protein At2g41720 
 cit-r.1   102623809   pentatricopeptide repeat-containing protein At2g41720 
 nta-r.1   107800374   pentatricopeptide repeat-containing protein At2g41720 
 nta-r.1   107766839   pentatricopeptide repeat-containing protein At2g41720 

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Top 50 coexpressed genes to 100829628 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100829628 (bdi-r.1 coexpression data)

CoexMap"100829628"


bdiLOC100829628 | Entrez gene ID : 100829628      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 1 1 1 1 1 1 3 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003557384.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  nucl 1,  mito 1,  cysk 1,  cysk_nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_003557384.1)
Subcellular
localization
TargetP
chlo 9,  other 3  (predict for XP_003557384.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100829628
tae-r.2
for
123188627
tae-r.2
for
123052762
tae-r.2
for
123045037
hvu-r.1
for
123426169
osa-u.5
for
4342717
zma-u.5
for
100383403
sbi-r.1
for
8083906
ath-u.5
for
EMB2654
gma-u.5
for
100814643
sly-u.5
for
101267511
bra-r.6
for
103866580
vvi-u.5
for
100241921
ppo-u.5
for
7473612
mtr-u.5
for
11418476
ghi-r.1
for
121227898
ghi-r.1
for
107948668
ghi-r.1
for
107902254
bna-r.1
for
106450653
bna-r.1
for
106396458
sot-r.1
for
102602503
cit-r.1
for
102623809
nta-r.1
for
107800374
nta-r.1
for
107766839


Ortholog ID: 10711
Species bdi tae tae tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC100829628 LOC123188627 LOC123052762 LOC123045037 LOC123426169 LOC4342717 LOC100383403 LOC8083906 EMB2654 LOC100814643 LOC101267511 LOC103866580 LOC100241921 LOC7473612 LOC11418476 LOC121227898 LOC107948668 LOC107902254 LOC106450653 LOC106396458 LOC102602503 LOC102623809 LOC107800374 LOC107766839
Function* pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 uncharacterized LOC100383403 pentatricopeptide repeat-containing protein At2g41720 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720-like pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720 pentatricopeptide repeat-containing protein At2g41720
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi00561 Glycerolipid metabolism 2
bdi00566 Sulfoquinovose metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 5
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04626 Plant-pathogen interaction 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100829628 123188627 123052762 123045037 123426169 4342717 100383403 8083906 818771 100814643 101267511 103866580 100241921 7473612 11418476 121227898 107948668 107902254 106450653 106396458 102602503 102623809 107800374 107766839
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