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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100242436   uncharacterized LOC100242436 
 vvi-r.5   100242436   uncharacterized LOC100242436 
 vvi-m.5   100242436   uncharacterized LOC100242436 
 ath-u.5   AT2G19870   tRNA/rRNA methyltransferase (SpoU) family protein 
 gma-u.5   100802486   uncharacterized tRNA/rRNA methyltransferase slr0955 
 bra-r.6   103828272   uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 
 ppo-u.5   7488946   uncharacterized LOC7488946 
 mtr-u.5   11407573   rRNA methyltransferase 1, mitochondrial 
 ghi-r.1   121231934   rRNA methyltransferase 1, mitochondrial 
 ghi-r.1   107932263   rRNA methyltransferase 1, mitochondrial 
 bna-r.1   106357579   uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 
 bna-r.1   125589985   uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913-like 
 cit-r.1   102627548   uncharacterized LOC102627548 
 sly-u.5   101264218   uncharacterized LOC101264218 
 sot-r.1   102604020   rRNA methyltransferase 1, mitochondrial 
 nta-r.1   107767488   uncharacterized LOC107767488 
 nta-r.1   107799835   uncharacterized LOC107799835 
 osa-u.5   4326542   uncharacterized LOC4326542 
 zma-u.5   100273751   tRNA/rRNA methyltransferase (SpoU) family protein 
 tae-r.2   123070650   uncharacterized tRNA/rRNA methyltransferase slr0955 
 tae-r.2   123079064   uncharacterized tRNA/rRNA methyltransferase slr0955 
 tae-r.2   123061955   uncharacterized tRNA/rRNA methyltransferase slr0955 
 hvu-r.1   123440237   uncharacterized tRNA/rRNA methyltransferase slr0955 
 sbi-r.1   8075552   rRNA methyltransferase 1, mitochondrial 
 bdi-r.1   100825303   rRNA methyltransferase 1, mitochondrial 
 cre-r.1   CHLRE_13g566150v5   uncharacterized protein 

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Top 50 coexpressed genes to 100242436 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100242436 (vvi-u.5 coexpression data)

CoexMap"100242436"


vviLOC100242436 | Entrez gene ID : 100242436      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031167 [list] [network] rRNA methylation  (35 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (557 genes)  IEA  
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (55 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_002280407.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  cyto 1,  vacu 1,  cyto_nucl 1  (predict for XP_002280407.1)
Subcellular
localization
TargetP
mito 1  (predict for XP_002280407.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100242436
vvi-r.5
for
100242436
vvi-m.5
for
100242436
ath-u.5
for
AT2G19870
gma-u.5
for
100802486
bra-r.6
for
103828272
ppo-u.5
for
7488946
mtr-u.5
for
11407573
ghi-r.1
for
121231934
ghi-r.1
for
107932263
bna-r.1
for
106357579
bna-r.1
for
125589985
cit-r.1
for
102627548
sly-u.5
for
101264218
sot-r.1
for
102604020
nta-r.1
for
107767488
nta-r.1
for
107799835
osa-u.5
for
4326542
zma-u.5
for
100273751
tae-r.2
for
123070650
tae-r.2
for
123079064
tae-r.2
for
123061955
hvu-r.1
for
123440237
sbi-r.1
for
8075552
bdi-r.1
for
100825303
cre-r.1
for
CHLRE_13g566150v5


Ortholog ID: 10662
Species vvi ath gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100242436 AT2G19870 LOC100802486 LOC103828272 LOC7488946 LOC11407573 LOC121231934 LOC107932263 LOC106357579 LOC125589985 LOC102627548 LOC101264218 LOC102604020 LOC107767488 LOC107799835 LOC4326542 LOC100273751 LOC123070650 LOC123079064 LOC123061955 LOC123440237 LOC8075552 LOC100825303 CHLRE_13g566150v5
Function* uncharacterized LOC100242436 tRNA/rRNA methyltransferase (SpoU) family protein uncharacterized tRNA/rRNA methyltransferase slr0955 uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 uncharacterized LOC7488946 rRNA methyltransferase 1, mitochondrial rRNA methyltransferase 1, mitochondrial rRNA methyltransferase 1, mitochondrial uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913-like uncharacterized LOC102627548 uncharacterized LOC101264218 rRNA methyltransferase 1, mitochondrial uncharacterized LOC107767488 uncharacterized LOC107799835 uncharacterized LOC4326542 tRNA/rRNA methyltransferase (SpoU) family protein uncharacterized tRNA/rRNA methyltransferase slr0955 uncharacterized tRNA/rRNA methyltransferase slr0955 uncharacterized tRNA/rRNA methyltransferase slr0955 uncharacterized tRNA/rRNA methyltransferase slr0955 rRNA methyltransferase 1, mitochondrial rRNA methyltransferase 1, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi00620 Pyruvate metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00740 Riboflavin metabolism 3
cit01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100242436 816506 100802486 103828272 7488946 11407573 121231934 107932263 106357579 125589985 102627548 101264218 102604020 107767488 107799835 4326542 100273751 123070650 123079064 123061955 123440237 8075552 100825303 5719054
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