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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100802486   uncharacterized tRNA/rRNA methyltransferase slr0955 
 gma-r.7   100802486   uncharacterized tRNA/rRNA methyltransferase slr0955 
 mtr-u.5   11407573   rRNA methyltransferase 1, mitochondrial 
 ppo-u.5   7488946   uncharacterized LOC7488946 
 ath-u.5   AT2G19870   tRNA/rRNA methyltransferase (SpoU) family protein 
 vvi-u.5   100242436   uncharacterized LOC100242436 
 sly-u.5   101264218   uncharacterized LOC101264218 
 osa-u.5   4326542   uncharacterized LOC4326542 
 zma-u.5   100273751   tRNA/rRNA methyltransferase (SpoU) family protein 

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Top 50 coexpressed genes to 100802486 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100802486 (gma-u.5 coexpression data)

CoexMap"100802486"


gmaLOC100802486 | Entrez gene ID : 100802486      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031167 [list] [network] rRNA methylation  (45 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0016435 [list] [network] rRNA (guanine) methyltransferase activity  (8 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_003532473.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_003532473.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003532473.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100802486

.
gma-r.7
for
100802486

.
mtr-u.5
for
11407573

.
ppo-u.5
for
7488946

.
ath-u.5
for
AT2G19870

.
vvi-u.5
for
100242436

.
sly-u.5
for
101264218

.
osa-u.5
for
4326542

.
zma-u.5
for
100273751

.


Ortholog ID: 10662
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G19870 LOC100802486 LOC101264218 LOC4326542 LOC100273751 LOC103828272 LOC100242436 LOC7488946 LOC11407573 LOC123079064 LOC123070650 LOC123440237 LOC121231934 LOC107932263 LOC106357579 LOC125589985 CHLRE_13g566150v5 LOC8075552 LOC102604020 LOC102627548 LOC100825303 LOC107799835 LOC107767488
Function* tRNA/rRNA methyltransferase (SpoU) family protein uncharacterized tRNA/rRNA methyltransferase slr0955 uncharacterized LOC101264218 uncharacterized LOC4326542 tRNA/rRNA methyltransferase (SpoU) family protein uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 uncharacterized LOC100242436 uncharacterized LOC7488946 rRNA methyltransferase 1, mitochondrial uncharacterized tRNA/rRNA methyltransferase slr0955 uncharacterized tRNA/rRNA methyltransferase slr0955 uncharacterized tRNA/rRNA methyltransferase slr0955 rRNA methyltransferase 1, mitochondrial rRNA methyltransferase 1, mitochondrial uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913-like uncharacterized protein rRNA methyltransferase 1, mitochondrial rRNA methyltransferase 1, mitochondrial uncharacterized LOC102627548 rRNA methyltransferase 1, mitochondrial uncharacterized LOC107799835 uncharacterized LOC107767488
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi00620 Pyruvate metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00740 Riboflavin metabolism 3
cit01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816506 100802486 101264218 4326542 100273751 103828272 100242436 7488946 11407573 123079064 123070650 123440237 121231934 107932263 106357579 125589985 5719054 8075552 102604020 102627548 100825303 107799835 107767488
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