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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100244123   carbon catabolite repressor protein 4 homolog 3 
 vvi-r.5   100244123   carbon catabolite repressor protein 4 homolog 3 
 vvi-m.5   100244123   carbon catabolite repressor protein 4 homolog 3 
 vvi-u.5   100252635   carbon catabolite repressor protein 4 homolog 5 
 ath-u.5   AT3G18500   DNAse I-like superfamily protein 
 ath-u.5   AT1G73875   DNAse I-like superfamily protein 
 gma-u.5   100785524   carbon catabolite repressor protein 4 homolog 5 
 gma-u.5   100779393   carbon catabolite repressor protein 4 homolog 3 
 gma-u.5   100777474   carbon catabolite repressor protein 4 homolog 5 
 ppo-u.5   7490076   carbon catabolite repressor protein 4 homolog 5 
 mtr-u.5   25496848   carbon catabolite repressor protein 4 homolog 5 
 mtr-u.5   11416738   carbon catabolite repressor protein 4 homolog 3 
 sly-u.5   101261600   carbon catabolite repressor protein 4 homolog 3 
 sly-u.5   101244654   carbon catabolite repressor protein 4 homolog 5 
 osa-u.5   4340705   carbon catabolite repressor protein 4 homolog 3 
 zma-u.5   100273611   uncharacterized LOC100273611 

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Top 50 coexpressed genes to 100244123 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100244123 (vvi-u.5 coexpression data)

CoexMap"100244123"


vviLOC100244123 | Entrez gene ID : 100244123      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 3 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (31 genes)  IEA  
Protein XP_010663575.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_010663575.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_010663575.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100244123
vvi-r.5
for
100244123
vvi-m.5
for
100244123
vvi-u.5
for
100252635
ath-u.5
for
AT3G18500
ath-u.5
for
AT1G73875
gma-u.5
for
100785524
gma-u.5
for
100779393
gma-u.5
for
100777474
ppo-u.5
for
7490076
mtr-u.5
for
25496848
mtr-u.5
for
11416738
sly-u.5
for
101261600
sly-u.5
for
101244654
osa-u.5
for
4340705
zma-u.5
for
100273611


Ortholog ID: 5520
Species vvi vvi ath ath gma gma bra bra ppo mtr mtr ghi ghi bna bna cit cit sly sly sot sot nta nta osa zma tae tae hvu sbi
Symbol LOC100244123 LOC100252635 AT3G18500 AT1G73875 LOC100777474 LOC100785524 LOC103831863 LOC103869558 LOC7490076 LOC25496848 LOC11416738 LOC107904649 LOC107923110 LOC106367497 LOC111206691 LOC102625286 LOC102619027 LOC101261600 LOC101244654 LOC102601555 LOC102596606 LOC107808121 LOC107808691 LOC4340705 LOC100273611 LOC123151131 LOC123158755 LOC123410359 LOC8065770
Function* carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 5 DNAse I-like superfamily protein DNAse I-like superfamily protein carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 5-like carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3-like carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 uncharacterized LOC100273611 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3-like carbon catabolite repressor protein 4 homolog 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00670 One carbon pool by folate 2
ath00460 Cyanoamino acid metabolism 2
ath00500 Starch and sucrose metabolism 2
ath00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00511 Other glycan degradation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr00510 N-Glycan biosynthesis 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 3
bna04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
nta03015 mRNA surveillance pathway 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100244123 100252635 821380 843724 100777474 100785524 103831863 103869558 7490076 25496848 11416738 107904649 107923110 106367497 111206691 102625286 102619027 101261600 101244654 102601555 102596606 107808121 107808691 4340705 100273611 123151131 123158755 123410359 8065770
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