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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8065770   carbon catabolite repressor protein 4 homolog 3 
 zma-u.5   100273611   uncharacterized LOC100273611 
 osa-u.5   4340705   carbon catabolite repressor protein 4 homolog 3 
 ath-u.5   AT3G18500   DNAse I-like superfamily protein 
 ath-u.5   AT1G73875   DNAse I-like superfamily protein 
 gma-u.5   100785524   carbon catabolite repressor protein 4 homolog 5 
 gma-u.5   100779393   carbon catabolite repressor protein 4 homolog 3 
 gma-u.5   100777474   carbon catabolite repressor protein 4 homolog 5 
 sly-u.5   101261600   carbon catabolite repressor protein 4 homolog 3 
 sly-u.5   101244654   carbon catabolite repressor protein 4 homolog 5 
 vvi-u.5   100252635   carbon catabolite repressor protein 4 homolog 5 
 vvi-u.5   100244123   carbon catabolite repressor protein 4 homolog 3 
 ppo-u.5   7490076   carbon catabolite repressor protein 4 homolog 5 
 mtr-u.5   11416738   carbon catabolite repressor protein 4 homolog 3 
 mtr-u.5   25496848   carbon catabolite repressor protein 4 homolog 5 

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Top 50 coexpressed genes to 8065770 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8065770 (sbi-r.1 coexpression data)

CoexMap"8065770"


sbiLOC8065770 | Entrez gene ID : 8065770      
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 1 2 3 2 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (39 genes)  IEA  
Protein XP_002438205.1 [sequence] [blastp]
XP_021305271.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_002438205.1)
chlo 7,  mito 2  (predict for XP_021305271.1)
Subcellular
localization
TargetP
chlo 8,  mito 6  (predict for XP_002438205.1)
chlo 8,  mito 6  (predict for XP_021305271.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8065770

.
zma-u.5
for
100273611

.
osa-u.5
for
4340705

.
ath-u.5
for
AT3G18500

.
ath-u.5
for
AT1G73875

.
gma-u.5
for
100785524

.
gma-u.5
for
100779393

.
gma-u.5
for
100777474

.
sly-u.5
for
101261600

.
sly-u.5
for
101244654

.
vvi-u.5
for
100252635

.
vvi-u.5
for
100244123

.
ppo-u.5
for
7490076

.
mtr-u.5
for
11416738

.
mtr-u.5
for
25496848

.


Ortholog ID: 5520
Species ath ath gma gma sly sly osa zma bra bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit nta nta
Symbol AT3G18500 AT1G73875 LOC100777474 LOC100785524 LOC101261600 LOC101244654 LOC4340705 LOC100273611 LOC103831863 LOC103869558 LOC100244123 LOC100252635 LOC7490076 LOC25496848 LOC11416738 LOC123151131 LOC123158755 LOC123410359 LOC107904649 LOC107923110 LOC106367497 LOC111206691 LOC8065770 LOC102601555 LOC102596606 LOC102625286 LOC102619027 LOC107808121 LOC107808691
Function* DNAse I-like superfamily protein DNAse I-like superfamily protein carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3 uncharacterized LOC100273611 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3-like carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 5-like carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 3-like carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3 carbon catabolite repressor protein 4 homolog 5 carbon catabolite repressor protein 4 homolog 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00670 One carbon pool by folate 2
ath00460 Cyanoamino acid metabolism 2
ath00500 Starch and sucrose metabolism 2
ath00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00511 Other glycan degradation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr00510 N-Glycan biosynthesis 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 3
bna04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
nta03015 mRNA surveillance pathway 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821380 843724 100777474 100785524 101261600 101244654 4340705 100273611 103831863 103869558 100244123 100252635 7490076 25496848 11416738 123151131 123158755 123410359 107904649 107923110 106367497 111206691 8065770 102601555 102596606 102625286 102619027 107808121 107808691
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