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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100246616   dihydrolipoyl dehydrogenase 2, chloroplastic 
 vvi-r.5   100246616   dihydrolipoyl dehydrogenase 2, chloroplastic 
 vvi-m.5   100246616   dihydrolipoyl dehydrogenase 2, chloroplastic 
 vvi-u.5   100251123   dihydrolipoyl dehydrogenase 2, chloroplastic 
 ath-u.5   LPD1   lipoamide dehydrogenase 1 
 ath-u.5   AT4G16155   dihydrolipoamide dehydrogenase 
 gma-u.5   100809578   dihydrolipoyl dehydrogenase 2, chloroplastic 
 gma-u.5   100803176   dihydrolipoyl dehydrogenase 2, chloroplastic 
 gma-u.5   100782004   dihydrolipoyl dehydrogenase 2, chloroplastic 
 bra-r.6   103870046   dihydrolipoyl dehydrogenase 2, chloroplastic 
 bra-r.6   103859689   dihydrolipoyl dehydrogenase 1, chloroplastic 
 ppo-u.5   7489415   dihydrolipoyl dehydrogenase 2, chloroplastic 
 ppo-u.5   7485915   dihydrolipoyl dehydrogenase 2, chloroplastic 
 mtr-u.5   11408806   dihydrolipoyl dehydrogenase 1, chloroplastic 
 mtr-u.5   11422305   dihydrolipoyl dehydrogenase 1, chloroplastic 
 ghi-r.1   107888950   dihydrolipoyl dehydrogenase 2, chloroplastic 
 ghi-r.1   107892112   dihydrolipoyl dehydrogenase 2, chloroplastic 
 ghi-r.1   107926533   dihydrolipoyl dehydrogenase 2, chloroplastic 
 bna-r.1   106358154   dihydrolipoyl dehydrogenase 1, chloroplastic 
 bna-r.1   106439448   dihydrolipoyl dehydrogenase 1, chloroplastic 
 bna-r.1   111213442   dihydrolipoyl dehydrogenase 2, chloroplastic 
 cit-r.1   102624649   dihydrolipoyl dehydrogenase 2, chloroplastic-like 
 sly-u.5   101245293   dihydrolipoyl dehydrogenase 2, chloroplastic 
 sly-u.5   101246429   dihydrolipoyl dehydrogenase 1, chloroplastic 
 sot-r.1   102599296   dihydrolipoyl dehydrogenase 1, chloroplastic-like 
 sot-r.1   102602804   dihydrolipoyl dehydrogenase 2, chloroplastic-like 
 nta-r.1   107802918   dihydrolipoyl dehydrogenase 2, chloroplastic 
 nta-r.1   107782283   dihydrolipoyl dehydrogenase 2, chloroplastic 
 nta-r.1   107783795   dihydrolipoyl dehydrogenase 2, chloroplastic 
 osa-u.5   4326849   dihydrolipoyl dehydrogenase 1, chloroplastic 
 osa-u.5   4337862   dihydrolipoyl dehydrogenase 1, chloroplastic 
 zma-u.5   100381818   dihydrolipoyl dehydrogenase 
 zma-u.5   100383599   uncharacterized LOC100383599 
 tae-r.2   123113336   dihydrolipoyl dehydrogenase 1, chloroplastic 
 tae-r.2   123038214   dihydrolipoyl dehydrogenase 2, chloroplastic 
 tae-r.2   123180580   dihydrolipoyl dehydrogenase 2, chloroplastic 
 hvu-r.1   123426077   dihydrolipoyl dehydrogenase 2, chloroplastic-like 
 sbi-r.1   110433993   dihydrolipoyl dehydrogenase 1, chloroplastic-like 
 sbi-r.1   8071187   dihydrolipoyl dehydrogenase 1, chloroplastic 
 bdi-r.1   100826755   dihydrolipoyl dehydrogenase 1, chloroplastic 
 bdi-r.1   100837564   dihydrolipoyl dehydrogenase 2, chloroplastic 
 cre-r.1   CHLRE_01g016514v5   uncharacterized protein 

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Top 50 coexpressed genes to 100246616 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100246616 (vvi-u.5 coexpression data)

CoexMap"100246616"


vviLOC100246616 | Entrez gene ID : 100246616      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 2 2 2 3 3 1 2 2 3 2 2 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
vvi00020 [list] [network] Citrate cycle (TCA cycle) (51 genes)
vvi00260 [list] [network] Glycine, serine and threonine metabolism (63 genes)
vvi00280 [list] [network] Valine, leucine and isoleucine degradation (56 genes)
vvi00310 [list] [network] Lysine degradation (33 genes)
vvi00380 [list] [network] Tryptophan metabolism (70 genes)
vvi00620 [list] [network] Pyruvate metabolism (103 genes)
vvi00630 [list] [network] Glyoxylate and dicarboxylate metabolism (76 genes)
vvi00640 [list] [network] Propanoate metabolism (45 genes)
vvi00670 [list] [network] One carbon pool by folate (40 genes)
vvi00785 [list] [network] Lipoic acid metabolism (31 genes)
vvi01200 [list] [network] Carbon metabolism (253 genes)
vvi01210 [list] [network] 2-Oxocarboxylic acid metabolism (81 genes)
vvi01240 [list] [network] Biosynthesis of cofactors (226 genes)
GO BP
GO CC
GO:0045252 [list] [network] oxoglutarate dehydrogenase complex  (6 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (505 genes)  IEA  
GO MF
GO:0004148 [list] [network] dihydrolipoyl dehydrogenase (NADH) activity  (4 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (145 genes)  IEA  
Protein XP_002276853.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002276853.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002276853.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100246616
vvi-r.5
for
100246616
vvi-m.5
for
100246616
vvi-u.5
for
100251123
ath-u.5
for
LPD1
ath-u.5
for
AT4G16155
gma-u.5
for
100809578
gma-u.5
for
100803176
gma-u.5
for
100782004
bra-r.6
for
103870046
bra-r.6
for
103859689
ppo-u.5
for
7489415
ppo-u.5
for
7485915
mtr-u.5
for
11408806
mtr-u.5
for
11422305
ghi-r.1
for
107888950
ghi-r.1
for
107892112
ghi-r.1
for
107926533
bna-r.1
for
106358154
bna-r.1
for
106439448
bna-r.1
for
111213442
cit-r.1
for
102624649
sly-u.5
for
101245293
sly-u.5
for
101246429
sot-r.1
for
102599296
sot-r.1
for
102602804
nta-r.1
for
107802918
nta-r.1
for
107782283
nta-r.1
for
107783795
osa-u.5
for
4326849
osa-u.5
for
4337862
zma-u.5
for
100381818
zma-u.5
for
100383599
tae-r.2
for
123113336
tae-r.2
for
123038214
tae-r.2
for
123180580
hvu-r.1
for
123426077
sbi-r.1
for
110433993
sbi-r.1
for
8071187
bdi-r.1
for
100826755
bdi-r.1
for
100837564
cre-r.1
for
CHLRE_01g016514v5


Ortholog ID: 4078
Species vvi vvi ath ath gma gma gma bra bra ppo ppo mtr mtr ghi ghi ghi bna bna bna cit sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC100246616 LOC100251123 LPD1 AT4G16155 LOC100809578 LOC100803176 LOC100782004 LOC103870046 LOC103859689 LOC7489415 LOC7485915 LOC11408806 LOC11422305 LOC107888950 LOC107892112 LOC107926533 LOC106439448 LOC111213442 LOC106446625 LOC102624649 LOC101245293 LOC101246429 LOC102599296 LOC102602804 LOC107802918 LOC107782283 LOC107783795 LOC4326849 LOC4337862 LOC100381818 LOC100383599 LOC123113336 LOC123038214 LOC123180580 LOC123426077 LOC110433993 LOC8071187 LOC100826755 LOC100837564 CHLRE_01g016514v5
Function* dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic lipoamide dehydrogenase 1 dihydrolipoamide dehydrogenase dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic-like dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic-like dihydrolipoyl dehydrogenase 2, chloroplastic-like dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase uncharacterized LOC100383599 dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic-like dihydrolipoyl dehydrogenase 1, chloroplastic-like dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00061 Fatty acid biosynthesis 8
vvi01212 Fatty acid metabolism 7
vvi00620 Pyruvate metabolism 6
vvi01200 Carbon metabolism 6
vvi01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 7
ath01200 Carbon metabolism 7
ath01240 Biosynthesis of cofactors 5
ath00010 Glycolysis / Gluconeogenesis 5
ath00061 Fatty acid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01212 Fatty acid metabolism 10
ath00061 Fatty acid biosynthesis 9
ath01200 Carbon metabolism 9
ath01240 Biosynthesis of cofactors 8
ath00620 Pyruvate metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 8
gma01200 Carbon metabolism 8
gma00061 Fatty acid biosynthesis 7
gma01212 Fatty acid metabolism 7
gma00640 Propanoate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 10
gma01212 Fatty acid metabolism 10
gma01200 Carbon metabolism 9
gma00620 Pyruvate metabolism 8
gma00640 Propanoate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 9
gma01200 Carbon metabolism 9
gma00061 Fatty acid biosynthesis 6
gma01212 Fatty acid metabolism 6
gma00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00061 Fatty acid biosynthesis 8
bra01212 Fatty acid metabolism 8
bra00620 Pyruvate metabolism 7
bra01200 Carbon metabolism 7
bra01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 8
bra01200 Carbon metabolism 8
bra00061 Fatty acid biosynthesis 6
bra01212 Fatty acid metabolism 5
bra00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00620 Pyruvate metabolism 5
ppo00640 Propanoate metabolism 5
ppo01200 Carbon metabolism 5
ppo01240 Biosynthesis of cofactors 4
ppo00061 Fatty acid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00061 Fatty acid biosynthesis 10
ppo01212 Fatty acid metabolism 9
ppo00620 Pyruvate metabolism 8
ppo01200 Carbon metabolism 8
ppo01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 8
mtr00061 Fatty acid biosynthesis 7
mtr01212 Fatty acid metabolism 7
mtr00620 Pyruvate metabolism 7
mtr01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00620 Pyruvate metabolism 12
mtr01200 Carbon metabolism 12
mtr00061 Fatty acid biosynthesis 10
mtr01212 Fatty acid metabolism 10
mtr00010 Glycolysis / Gluconeogenesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00020 Citrate cycle (TCA cycle) 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00020 Citrate cycle (TCA cycle) 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 10
ghi00010 Glycolysis / Gluconeogenesis 6
ghi00620 Pyruvate metabolism 6
ghi01200 Carbon metabolism 6
ghi00061 Fatty acid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 15
bna01200 Carbon metabolism 15
bna00640 Propanoate metabolism 9
bna00010 Glycolysis / Gluconeogenesis 8
bna00061 Fatty acid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 8
bna01212 Fatty acid metabolism 8
bna01200 Carbon metabolism 7
bna00620 Pyruvate metabolism 6
bna00640 Propanoate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 7
bna01240 Biosynthesis of cofactors 7
bna00061 Fatty acid biosynthesis 6
bna01212 Fatty acid metabolism 6
bna00780 Biotin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 10
cit00620 Pyruvate metabolism 9
cit00061 Fatty acid biosynthesis 7
cit01212 Fatty acid metabolism 7
cit00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 11
sly01200 Carbon metabolism 11
sly00061 Fatty acid biosynthesis 9
sly01212 Fatty acid metabolism 9
sly00010 Glycolysis / Gluconeogenesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 2
sly00640 Propanoate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 2
sot00640 Propanoate metabolism 2
sot01200 Carbon metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 8
sot01212 Fatty acid metabolism 8
sot00620 Pyruvate metabolism 7
sot01200 Carbon metabolism 7
sot01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 4
nta01200 Carbon metabolism 4
nta00020 Citrate cycle (TCA cycle) 2
nta00260 Glycine, serine and threonine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00260 Glycine, serine and threonine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 10
nta00061 Fatty acid biosynthesis 8
nta00780 Biotin metabolism 8
nta01212 Fatty acid metabolism 8
nta00010 Glycolysis / Gluconeogenesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 8
osa01200 Carbon metabolism 8
osa00010 Glycolysis / Gluconeogenesis 7
osa00061 Fatty acid biosynthesis 6
osa01210 2-Oxocarboxylic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 9
osa01200 Carbon metabolism 9
osa00010 Glycolysis / Gluconeogenesis 7
osa01212 Fatty acid metabolism 6
osa00061 Fatty acid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 7
zma00061 Fatty acid biosynthesis 6
zma00780 Biotin metabolism 6
zma01212 Fatty acid metabolism 6
zma00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 9
zma00010 Glycolysis / Gluconeogenesis 8
zma00620 Pyruvate metabolism 8
zma00061 Fatty acid biosynthesis 7
zma00020 Citrate cycle (TCA cycle) 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 14
tae01200 Carbon metabolism 11
tae00010 Glycolysis / Gluconeogenesis 9
tae00020 Citrate cycle (TCA cycle) 6
tae00640 Propanoate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 16
tae01200 Carbon metabolism 13
tae01212 Fatty acid metabolism 10
tae00010 Glycolysis / Gluconeogenesis 10
tae00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 16
tae01200 Carbon metabolism 13
tae00010 Glycolysis / Gluconeogenesis 10
tae01212 Fatty acid metabolism 8
tae00785 Lipoic acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01210 2-Oxocarboxylic acid metabolism 5
hvu00010 Glycolysis / Gluconeogenesis 4
hvu00020 Citrate cycle (TCA cycle) 4
hvu00620 Pyruvate metabolism 4
hvu00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi00510 N-Glycan biosynthesis 6
sbi00513 Various types of N-glycan biosynthesis 6
sbi00010 Glycolysis / Gluconeogenesis 5
sbi00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00061 Fatty acid biosynthesis 7
bdi01212 Fatty acid metabolism 6
bdi00620 Pyruvate metabolism 5
bdi00020 Citrate cycle (TCA cycle) 4
bdi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 9
cre01200 Carbon metabolism 9
cre00061 Fatty acid biosynthesis 9
cre01212 Fatty acid metabolism 9
cre00010 Glycolysis / Gluconeogenesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100246616 100251123 820951 827307 100809578 100803176 100782004 103870046 103859689 7489415 7485915 11408806 11422305 107888950 107892112 107926533 106439448 111213442 106446625 102624649 101245293 101246429 102599296 102602804 107802918 107782283 107783795 4326849 4337862 100381818 100383599 123113336 123038214 123180580 123426077 110433993 8071187 100826755 100837564 5715128
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