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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100247562   uncharacterized LOC100247562 
 vvi-r.5   100247562   uncharacterized LOC100247562 
 ath-u.5   AT4G19610   nucleotide/nucleic acid binding protein 
 gma-u.5   100798742   multiple RNA-binding domain-containing protein 1 
 gma-u.5   100796243   multiple RNA-binding domain-containing protein 1 
 bra-r.6   103857520   multiple RNA-binding domain-containing protein 1 
 ppo-u.5   7465351   uncharacterized LOC7465351 
 mtr-u.5   25499102   multiple RNA-binding domain-containing protein 1 
 mtr-u.5   25499207   multiple RNA-binding domain-containing protein 1 
 ghi-r.1   107897483   probable RNA-binding protein 19 
 ghi-r.1   107916438   probable RNA-binding protein 19 
 bna-r.1   106377096   multiple RNA-binding domain-containing protein 1-like 
 bna-r.1   106437782   multiple RNA-binding domain-containing protein 1 
 cit-r.1   102613427   multiple RNA-binding domain-containing protein 1 
 sly-u.5   101251738   uncharacterized LOC101251738 
 sot-r.1   102592870   multiple RNA-binding domain-containing protein 1 
 nta-r.1   107799550   multiple RNA-binding domain-containing protein 1-like 
 nta-r.1   107826750   uncharacterized LOC107826750 
 osa-u.5   4336958   multiple RNA-binding domain-containing protein 1 
 zma-u.5   118475651   multiple RNA-binding domain-containing protein 1-like 
 zma-u.5   100279860   nucleotide binding 
 tae-r.2   123054325   multiple RNA-binding domain-containing protein 1 
 tae-r.2   123190214   multiple RNA-binding domain-containing protein 1 
 hvu-r.1   123427640   multiple RNA-binding domain-containing protein 1 
 sbi-r.1   8063955   multiple RNA-binding domain-containing protein 1 
 bdi-r.1   100827447   multiple RNA-binding domain-containing protein 1 
 cre-r.1   CHLRE_16g685200v5   uncharacterized protein 

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Top 50 coexpressed genes to 100247562 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100247562 (vvi-u.5 coexpression data)

CoexMap"100247562"


vviLOC100247562 | Entrez gene ID : 100247562    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 2 2 2 1 1 1 2 1 2 2 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_010649344.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  plas 1  (predict for XP_010649344.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_010649344.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100247562
vvi-r.5
for
100247562
ath-u.5
for
AT4G19610
gma-u.5
for
100798742
gma-u.5
for
100796243
bra-r.6
for
103857520
ppo-u.5
for
7465351
mtr-u.5
for
25499102
mtr-u.5
for
25499207
ghi-r.1
for
107897483
ghi-r.1
for
107916438
bna-r.1
for
106377096
bna-r.1
for
106437782
cit-r.1
for
102613427
sly-u.5
for
101251738
sot-r.1
for
102592870
nta-r.1
for
107799550
nta-r.1
for
107826750
osa-u.5
for
4336958
zma-u.5
for
118475651
zma-u.5
for
100279860
tae-r.2
for
123054325
tae-r.2
for
123190214
hvu-r.1
for
123427640
sbi-r.1
for
8063955
bdi-r.1
for
100827447
cre-r.1
for
CHLRE_16g685200v5


Ortholog ID: 8088
Species vvi ath gma gma bra ppo mtr mtr ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC100247562 AT4G19610 LOC100798742 LOC100796243 LOC103857520 LOC7465351 LOC25499102 LOC25499207 LOC107897483 LOC107916438 LOC106377096 LOC106437782 LOC102613427 LOC101251738 LOC102592870 LOC107799550 LOC107826750 LOC4336958 LOC118475651 LOC100279860 LOC123054325 LOC123190214 LOC123427640 LOC8063955 LOC100827447 CHLRE_16g685200v5
Function* uncharacterized LOC100247562 nucleotide/nucleic acid binding protein multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 uncharacterized LOC7465351 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 probable RNA-binding protein 19 probable RNA-binding protein 19 multiple RNA-binding domain-containing protein 1-like multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 uncharacterized LOC101251738 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1-like uncharacterized LOC107826750 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1-like nucleotide binding multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03013 Nucleocytoplasmic transport 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100247562 827703 100798742 100796243 103857520 7465351 25499102 25499207 107897483 107916438 106377096 106437782 102613427 101251738 102592870 107799550 107826750 4336958 118475651 100279860 123054325 123190214 123427640 8063955 100827447 66056747
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