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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7465351   uncharacterized LOC7465351 
 ppo-r.4   7465351   uncharacterized LOC7465351 
 ppo-m.4   7465351   uncharacterized LOC7465351 
 gma-u.5   100798742   multiple RNA-binding domain-containing protein 1 
 gma-u.5   100796243   multiple RNA-binding domain-containing protein 1 
 mtr-u.5   25499207   multiple RNA-binding domain-containing protein 1 
 mtr-u.5   25499102   multiple RNA-binding domain-containing protein 1 
 ath-u.5   AT4G19610   nucleotide/nucleic acid binding protein 
 vvi-u.5   100247562   uncharacterized LOC100247562 
 sly-u.5   101251738   uncharacterized LOC101251738 
 osa-u.5   4336958   multiple RNA-binding domain-containing protein 1 
 zma-u.5   118475651   multiple RNA-binding domain-containing protein 1-like 
 zma-u.5   100279860   nucleotide binding 

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Top 50 coexpressed genes to 7465351 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465351 (ppo-u.5 coexpression data)

CoexMap"7465351"


ppoLOC7465351 | Entrez gene ID : 7465351    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048026 [list] [network] positive regulation of mRNA splicing, via spliceosome  (6 genes)  IEA  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (181 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_024453504.1 [sequence] [blastp]
XP_024453505.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 2  (predict for XP_024453504.1)
nucl 6,  chlo 2,  cyto 1,  cysk 1  (predict for XP_024453505.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_024453504.1)
other 6,  mito 5  (predict for XP_024453505.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7465351

.
ppo-r.4
for
7465351

.
ppo-m.4
for
7465351

.
gma-u.5
for
100798742

.
gma-u.5
for
100796243

.
mtr-u.5
for
25499207

.
mtr-u.5
for
25499102

.
ath-u.5
for
AT4G19610

.
vvi-u.5
for
100247562

.
sly-u.5
for
101251738

.
osa-u.5
for
4336958

.
zma-u.5
for
118475651

.
zma-u.5
for
100279860

.


Ortholog ID: 8088
Species ath gma gma sly osa zma zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G19610 LOC100798742 LOC100796243 LOC101251738 LOC4336958 LOC100279860 LOC118475651 LOC103857520 LOC100247562 LOC7465351 LOC25499207 LOC25499102 LOC123190214 LOC123054325 LOC123427640 LOC107897483 LOC107916438 LOC106377096 LOC106437782 CHLRE_16g685200v5 LOC8063955 LOC102592870 LOC102613427 LOC100827447 LOC107826750 LOC107799550
Function* nucleotide/nucleic acid binding protein multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 uncharacterized LOC101251738 multiple RNA-binding domain-containing protein 1 nucleotide binding multiple RNA-binding domain-containing protein 1-like multiple RNA-binding domain-containing protein 1 uncharacterized LOC100247562 uncharacterized LOC7465351 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 probable RNA-binding protein 19 probable RNA-binding protein 19 multiple RNA-binding domain-containing protein 1-like multiple RNA-binding domain-containing protein 1 uncharacterized protein multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 multiple RNA-binding domain-containing protein 1 uncharacterized LOC107826750 multiple RNA-binding domain-containing protein 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03013 Nucleocytoplasmic transport 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827703 100798742 100796243 101251738 4336958 100279860 118475651 103857520 100247562 7465351 25499207 25499102 123190214 123054325 123427640 107897483 107916438 106377096 106437782 66056747 8063955 102592870 102613427 100827447 107826750 107799550
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