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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100248830   uncharacterized LOC100248830 
 vvi-r.5   100248830   uncharacterized LOC100248830 
 vvi-u.5   100265400   uncharacterized LOC100265400 
 ath-u.5   AT3G03570   signal transducer, putative (DUF3550/UPF0682) 
 ath-u.5   AT4G40050   signal transducer, putative (DUF3550/UPF0682) 
 gma-u.5   100788132   protein SCAI homolog 
 gma-u.5   100801761   protein SCAI 
 gma-u.5   100807440   protein SCAI 
 bra-r.6   103859005   protein SCAI 
 bra-r.6   108870470   protein SCAI homolog 
 bra-r.6   117131868   protein SCAI homolog 
 ppo-u.5   7479181   uncharacterized LOC7479181 
 ppo-u.5   7482417   uncharacterized LOC7482417 
 ppo-u.5   7490196   uncharacterized LOC7490196 
 mtr-u.5   25500191   protein SCAI 
 mtr-u.5   25501869   protein SCAI homolog 
 ghi-r.1   107945387   protein SCAI 
 ghi-r.1   107937741   protein SCAI 
 ghi-r.1   107934222   protein SCAI 
 bna-r.1   106439499   protein SCAI 
 bna-r.1   106435092   protein SCAI-like 
 bna-r.1   106438962   protein SCAI-like 
 cit-r.1   102615830   uncharacterized LOC102615830 
 cit-r.1   102625006   uncharacterized LOC102625006 
 sly-u.5   101254938   uncharacterized LOC101254938 
 sly-u.5   101262582   uncharacterized LOC101262582 
 sot-r.1   102598970   protein SCAI 
 sot-r.1   102587300   protein SCAI 
 nta-r.1   107799399   uncharacterized LOC107799399 
 nta-r.1   107810537   uncharacterized LOC107810537 
 nta-r.1   107813076   uncharacterized LOC107813076 
 osa-u.5   4347932   uncharacterized LOC4347932 
 osa-u.5   4347334   uncharacterized LOC4347334 
 zma-u.5   100278917   protein SCAI homolog 
 zma-u.5   100278709   uncharacterized LOC100278709 
 tae-r.2   123104046   protein SCAI homolog 
 tae-r.2   123121537   protein SCAI 
 tae-r.2   123112274   protein SCAI homolog 
 hvu-r.1   123398995   protein SCAI homolog 
 hvu-r.1   123397295   protein SCAI 
 sbi-r.1   8063339   protein SCAI homolog 
 sbi-r.1   8083264   protein SCAI homolog 
 bdi-r.1   100833218   protein SCAI homolog 
 bdi-r.1   100831896   protein SCAI 
 cre-r.1   CHLRE_14g633100v5   uncharacterized protein 

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Top 50 coexpressed genes to 100248830 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100248830 (vvi-u.5 coexpression data)

CoexMap"100248830"


vviLOC100248830 | Entrez gene ID : 100248830      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 3 3 2 3 3 2 2 2 3 2 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (199 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0003714 [list] [network] transcription corepressor activity  (29 genes)  IEA  
Protein XP_003632475.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 1,  cyto 1,  golg 1,  plas 1,  vacu 1,  E.R. 1,  chlo_mito 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_003632475.2)
Subcellular
localization
TargetP
other 8  (predict for XP_003632475.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100248830
vvi-r.5
for
100248830
vvi-u.5
for
100265400
ath-u.5
for
AT3G03570
ath-u.5
for
AT4G40050
gma-u.5
for
100788132
gma-u.5
for
100801761
gma-u.5
for
100807440
bra-r.6
for
103859005
bra-r.6
for
108870470
bra-r.6
for
117131868
ppo-u.5
for
7479181
ppo-u.5
for
7482417
ppo-u.5
for
7490196
mtr-u.5
for
25500191
mtr-u.5
for
25501869
ghi-r.1
for
107945387
ghi-r.1
for
107937741
ghi-r.1
for
107934222
bna-r.1
for
106439499
bna-r.1
for
106435092
bna-r.1
for
106438962
cit-r.1
for
102615830
cit-r.1
for
102625006
sly-u.5
for
101254938
sly-u.5
for
101262582
sot-r.1
for
102598970
sot-r.1
for
102587300
nta-r.1
for
107799399
nta-r.1
for
107810537
nta-r.1
for
107813076
osa-u.5
for
4347932
osa-u.5
for
4347334
zma-u.5
for
100278917
zma-u.5
for
100278709
tae-r.2
for
123104046
tae-r.2
for
123121537
tae-r.2
for
123112274
hvu-r.1
for
123398995
hvu-r.1
for
123397295
sbi-r.1
for
8063339
sbi-r.1
for
8083264
bdi-r.1
for
100833218
bdi-r.1
for
100831896
cre-r.1
for
CHLRE_14g633100v5


Ortholog ID: 3010
Species vvi vvi ath ath gma gma gma bra bra bra ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100248830 LOC100265400 AT3G03570 AT4G40050 LOC100788132 LOC100807440 LOC100810202 LOC103859005 LOC108870470 LOC117131868 LOC7479181 LOC7482417 LOC7490196 LOC25500191 LOC25501869 LOC107934222 LOC107897480 LOC107893109 LOC106439499 LOC106435092 LOC106438962 LOC102615830 LOC102625006 LOC101254938 LOC101262582 LOC102598970 LOC102587300 LOC107799399 LOC107813076 LOC107827462 LOC4347932 LOC4347334 LOC100278917 LOC100278709 LOC123104046 LOC123103752 LOC123111969 LOC123398995 LOC123397295 LOC8063339 LOC8083264 LOC100833218 LOC100831896 CHLRE_14g633100v5
Function* uncharacterized LOC100248830 uncharacterized LOC100265400 signal transducer, putative (DUF3550/UPF0682) signal transducer, putative (DUF3550/UPF0682) protein SCAI homolog protein SCAI protein SCAI protein SCAI protein SCAI homolog protein SCAI homolog uncharacterized LOC7479181 uncharacterized LOC7482417 uncharacterized LOC7490196 protein SCAI protein SCAI homolog protein SCAI protein SCAI protein SCAI protein SCAI protein SCAI-like protein SCAI-like uncharacterized LOC102615830 uncharacterized LOC102625006 uncharacterized LOC101254938 uncharacterized LOC101262582 protein SCAI protein SCAI uncharacterized LOC107799399 uncharacterized LOC107813076 uncharacterized LOC107827462 uncharacterized LOC4347932 uncharacterized LOC4347334 protein SCAI homolog uncharacterized LOC100278709 protein SCAI homolog protein SCAI protein SCAI protein SCAI homolog protein SCAI protein SCAI homolog protein SCAI homolog protein SCAI homolog protein SCAI uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 2
ath00020 Citrate cycle (TCA cycle) 2
ath00620 Pyruvate metabolism 2
ath00785 Lipoic acid metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra04136 Autophagy - other 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 3
mtr03013 Nucleocytoplasmic transport 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta04148 Efferocytosis 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 4
nta03013 Nucleocytoplasmic transport 4
nta04120 Ubiquitin mediated proteolysis 2
nta03018 RNA degradation 2
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 7
tae00770 Pantothenate and CoA biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 3
tae00770 Pantothenate and CoA biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
hvu04075 Plant hormone signal transduction 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04142 Lysosome 2
hvu00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
sbi01230 Biosynthesis of amino acids 4
sbi04148 Efferocytosis 2
sbi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi03250 Viral life cycle - HIV-1 2
bdi03272 Virion - Hepatitis viruses 2
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100248830 100265400 821234 830168 100788132 100807440 100810202 103859005 108870470 117131868 7479181 7482417 7490196 25500191 25501869 107934222 107897480 107893109 106439499 106435092 106438962 102615830 102625006 101254938 101262582 102598970 102587300 107799399 107813076 107827462 4347932 4347334 100278917 100278709 123104046 123103752 123111969 123398995 123397295 8063339 8083264 100833218 100831896 5718332
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