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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100249214   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 vvi-r.5   100249214   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 ath-u.5   TH1   thiamine biosynthesis protein 
 gma-u.5   100817332   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 gma-u.5   100811722   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 bra-r.6   103840813   thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic 
 mtr-u.5   11424195   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 ghi-r.1   107920644   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 ghi-r.1   107894239   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 bna-r.1   106347538   thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic 
 bna-r.1   106401390   thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic-like 
 cit-r.1   102610242   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 sly-u.5   101249213   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 sot-r.1   102601050   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 nta-r.1   107817826   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 nta-r.1   107767671   thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 
 osa-u.5   4351707   probable thiamine biosynthetic bifunctional enzyme, chloroplastic 
 zma-u.5   732816   phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase 
 tae-r.2   123144049   probable thiamine biosynthetic bifunctional enzyme, chloroplastic 
 tae-r.2   123136540   probable thiamine biosynthetic bifunctional enzyme, chloroplastic 
 tae-r.2   123132472   probable thiamine biosynthetic bifunctional enzyme, chloroplastic 
 hvu-r.1   123403434   probable thiamine biosynthetic bifunctional enzyme, chloroplastic 
 sbi-r.1   8084752   probable thiamine biosynthetic bifunctional enzyme, chloroplastic 
 bdi-r.1   100833618   probable thiamine biosynthetic bifunctional enzyme, chloroplastic 
 cre-r.1   CHLRE_08g365600v5   uncharacterized protein 

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Top 50 coexpressed genes to 100249214 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100249214 (vvi-u.5 coexpression data)

CoexMap"100249214"


vviLOC100249214 | Entrez gene ID : 100249214      
Species vvi ath gma bra mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre ppo
Paralog 2 1 2 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00730 [list] [network] Thiamine metabolism (25 genes)
vvi01240 [list] [network] Biosynthesis of cofactors (226 genes)
GO BP
GO:0009228 [list] [network] thiamine biosynthetic process  (5 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (557 genes)  IEA  
GO MF
GO:0004789 [list] [network] thiamine-phosphate diphosphorylase activity  (1 genes)  IEA  
GO:0008902 [list] [network] hydroxymethylpyrimidine kinase activity  (1 genes)  IEA  
GO:0008972 [list] [network] phosphomethylpyrimidine kinase activity  (1 genes)  IEA  
Protein XP_010658056.1 [sequence] [blastp]
XP_010658057.1 [sequence] [blastp]
XP_019079369.1 [sequence] [blastp]
XP_019079370.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_010658056.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_010658057.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_019079369.1)
cyto 5,  pero 3,  chlo 1,  mito 1,  vacu 1,  chlo_mito 1  (predict for XP_019079370.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_010658056.1)
chlo 8  (predict for XP_010658057.1)
chlo 8  (predict for XP_019079369.1)
other 8  (predict for XP_019079370.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100249214
vvi-r.5
for
100249214
ath-u.5
for
TH1
gma-u.5
for
100817332
gma-u.5
for
100811722
bra-r.6
for
103840813
mtr-u.5
for
11424195
ghi-r.1
for
107920644
ghi-r.1
for
107894239
bna-r.1
for
106347538
bna-r.1
for
106401390
cit-r.1
for
102610242
sly-u.5
for
101249213
sot-r.1
for
102601050
nta-r.1
for
107817826
nta-r.1
for
107767671
osa-u.5
for
4351707
zma-u.5
for
732816
tae-r.2
for
123144049
tae-r.2
for
123136540
tae-r.2
for
123132472
hvu-r.1
for
123403434
sbi-r.1
for
8084752
bdi-r.1
for
100833618
cre-r.1
for
CHLRE_08g365600v5


Ortholog ID: 10471
Species vvi ath gma gma bra mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100249214 TH1 LOC100817332 LOC100811722 LOC103840813 LOC11424195 LOC107920644 LOC107894239 LOC106347538 LOC106401390 LOC102610242 LOC101249213 LOC102601050 LOC107817826 LOC107767671 LOC4351707 LOC732816 LOC123144049 LOC123136540 LOC123132472 LOC123403434 LOC8084752 LOC100833618 CHLRE_08g365600v5
Function* thiamine biosynthetic bifunctional enzyme TH1, chloroplastic thiamine biosynthesis protein thiamine biosynthetic bifunctional enzyme TH1, chloroplastic thiamine biosynthetic bifunctional enzyme TH1, chloroplastic thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic thiamine biosynthetic bifunctional enzyme TH1, chloroplastic thiamine biosynthetic bifunctional enzyme TH1, chloroplastic thiamine biosynthetic bifunctional enzyme TH1, chloroplastic thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic-like thiamine biosynthetic bifunctional enzyme TH1, chloroplastic thiamine biosynthetic bifunctional enzyme TH1, chloroplastic thiamine biosynthetic bifunctional enzyme TH1, chloroplastic thiamine biosynthetic bifunctional enzyme TH1, chloroplastic thiamine biosynthetic bifunctional enzyme TH1, chloroplastic probable thiamine biosynthetic bifunctional enzyme, chloroplastic phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase probable thiamine biosynthetic bifunctional enzyme, chloroplastic probable thiamine biosynthetic bifunctional enzyme, chloroplastic probable thiamine biosynthetic bifunctional enzyme, chloroplastic probable thiamine biosynthetic bifunctional enzyme, chloroplastic probable thiamine biosynthetic bifunctional enzyme, chloroplastic probable thiamine biosynthetic bifunctional enzyme, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 4
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma01240 Biosynthesis of cofactors 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra03018 RNA degradation 3
bra00860 Porphyrin metabolism 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00410 beta-Alanine metabolism 3
mtr00240 Pyrimidine metabolism 2
mtr00770 Pantothenate and CoA biosynthesis 2
mtr00220 Arginine biosynthesis 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna00730 Thiamine metabolism 2
bna01240 Biosynthesis of cofactors 2
bna03082 ATP-dependent chromatin remodeling 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna00730 Thiamine metabolism 2
bna01240 Biosynthesis of cofactors 2
bna03015 mRNA surveillance pathway 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
cit04144 Endocytosis 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 4
sot01240 Biosynthesis of cofactors 3
sot00190 Oxidative phosphorylation 2
sot00290 Valine, leucine and isoleucine biosynthesis 2
sot01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta00920 Sulfur metabolism 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta00920 Sulfur metabolism 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 6
osa00470 D-Amino acid metabolism 3
osa00970 Aminoacyl-tRNA biosynthesis 3
osa01210 2-Oxocarboxylic acid metabolism 3
osa00300 Lysine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 3
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00300 Lysine biosynthesis 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00730 Thiamine metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 4
hvu01210 2-Oxocarboxylic acid metabolism 4
hvu00640 Propanoate metabolism 3
hvu00785 Lipoic acid metabolism 3
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 5
bdi03050 Proteasome 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100249214 838901 100817332 100811722 103840813 11424195 107920644 107894239 106347538 106401390 102610242 101249213 102601050 107817826 107767671 4351707 732816 123144049 123136540 123132472 123403434 8084752 100833618 66054353
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