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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100250267   protein PHR1-LIKE 2 
 vvi-r.5   100250267   protein PHR1-LIKE 2 
 vvi-m.5   100250267   protein PHR1-LIKE 2 
 vvi-u.5   100253272   protein PHR1-LIKE 2 
 ath-u.5   AT3G24120   Homeodomain-like superfamily protein 
 ath-u.5   UNE16   Homeodomain-like superfamily protein 
 gma-u.5   PHR35   MYB-CC domain-containing transcription factor PHR35 
 gma-u.5   PHR24   MYB-CC domain-containing transcription factor PHR24 
 gma-u.5   PHR13   MYB-CC domain-containing transcription factor PHR13 
 ppo-u.5   18106010   protein PHR1-LIKE 3 
 ppo-u.5   7461665   protein PHR1-LIKE 3 
 ppo-u.5   7461287   protein PHR1-LIKE 3 
 mtr-u.5   25484812   protein PHR1-LIKE 3 
 mtr-u.5   11407502   protein PHR1-LIKE 2 
 sly-u.5   101251768   protein PHR1-LIKE 3 
 sly-u.5   101263547   protein PHR1-LIKE 3-like 
 sly-u.5   101262095   protein PHR1-LIKE 3-like 
 osa-u.5   4345340   protein PHR1-LIKE 3 
 osa-u.5   4346660   protein PHR1-LIKE 2 
 zma-u.5   100282682   myb family transcription factor-related protein 
 zma-u.5   100282824   myb family transcription factor-related protein 
 zma-u.5   100272614   uncharacterized LOC100272614 

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Top 50 coexpressed genes to 100250267 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100250267 (vvi-u.5 coexpression data)

CoexMap"100250267"


vviLOC100250267 | Entrez gene ID : 100250267      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 3 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (925 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1602 genes)  IEA  
Protein XP_002268698.3 [sequence] [blastp]
XP_010650358.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  nucl 3,  chlo 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_002268698.3)
extr 4,  nucl 3,  chlo 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_010650358.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_002268698.3)
other 4,  chlo 3  (predict for XP_010650358.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100250267
vvi-r.5
for
100250267
vvi-m.5
for
100250267
vvi-u.5
for
100253272
ath-u.5
for
AT3G24120
ath-u.5
for
UNE16
gma-u.5
for
PHR35
gma-u.5
for
PHR24
gma-u.5
for
PHR13
ppo-u.5
for
18106010
ppo-u.5
for
7461665
ppo-u.5
for
7461287
mtr-u.5
for
25484812
mtr-u.5
for
11407502
sly-u.5
for
101251768
sly-u.5
for
101263547
sly-u.5
for
101262095
osa-u.5
for
4345340
osa-u.5
for
4346660
zma-u.5
for
100282682
zma-u.5
for
100282824
zma-u.5
for
100272614


Ortholog ID: 2908
Species vvi vvi ath ath gma gma bra bra ppo ppo mtr mtr ghi ghi bna bna cit cit sly sly sot sot nta nta osa osa zma zma tae tae hvu sbi bdi bdi
Symbol LOC100253272 LOC100250267 UNE16 AT3G24120 PHR13 PHR35 LOC103860014 LOC103831963 LOC7461665 LOC18106010 LOC25484812 LOC11407502 LOC121206278 LOC107939362 LOC106434060 LOC125600539 LOC102617659 LOC102627703 LOC101262095 LOC101251768 LOC102605067 LOC102586388 LOC107790657 LOC107828561 LOC4346660 LOC4345340 LOC100282682 LOC100282824 LOC123103457 LOC123111660 LOC123453061 LOC8064667 LOC100831869 LOC100838525
Function* protein PHR1-LIKE 2 protein PHR1-LIKE 2 Homeodomain-like superfamily protein Homeodomain-like superfamily protein MYB-CC domain-containing transcription factor PHR13 MYB-CC domain-containing transcription factor PHR35 protein PHR1-LIKE 2 protein PHR1-LIKE 2 protein PHR1-LIKE 3 protein PHR1-LIKE 3 protein PHR1-LIKE 3 protein PHR1-LIKE 2 protein PHR1-LIKE 2 protein PHR1-LIKE 3 protein PHR1-LIKE 2 protein PHR1-LIKE 2-like protein PHR1-LIKE 3 protein PHR1-LIKE 3-like protein PHR1-LIKE 3-like protein PHR1-LIKE 3 myb family transcription factor APL-like myb family transcription factor APL-like protein PHR1-LIKE 3-like protein PHR1-LIKE 2-like protein PHR1-LIKE 2 protein PHR1-LIKE 3 myb family transcription factor-related protein myb family transcription factor-related protein protein PHR1-LIKE 2 protein PHR1-LIKE 2 protein PHR1-LIKE 2-like protein PHR1-LIKE 3 protein PHR1-LIKE 2 protein PHR1-LIKE 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 4
vvi04120 Ubiquitin mediated proteolysis 3
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 2
ppo04136 Autophagy - other 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00905 Brassinosteroid biosynthesis 3
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna00310 Lysine degradation 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 3
sly04141 Protein processing in endoplasmic reticulum 3
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 3
nta01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100253272 100250267 826998 821998 100782369 100811831 103860014 103831963 7461665 18106010 25484812 11407502 121206278 107939362 106434060 125600539 102617659 102627703 101262095 101251768 102605067 102586388 107790657 107828561 4346660 4345340 100282682 100282824 123103457 123111660 123453061 8064667 100831869 100838525
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