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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107936319   protein PHR1-LIKE 3 
 ghi-r.1   107927729   protein PHR1-LIKE 3 
 ghi-r.1   107914828   protein PHR1-LIKE 3 
 ghi-r.1   107963742   protein PHR1-LIKE 2 
 ath-u.5   AT3G24120   Homeodomain-like superfamily protein 
 ath-u.5   UNE16   Homeodomain-like superfamily protein 
 bra-r.6   103831963   protein PHR1-LIKE 2 
 bra-r.6   103828672   protein PHR1-LIKE 2 
 bra-r.6   103860014   protein PHR1-LIKE 2 
 bna-r.1   125600539   protein PHR1-LIKE 2-like 
 bna-r.1   106451495   protein PHR1-LIKE 2 
 bna-r.1   106434060   protein PHR1-LIKE 2 
 cit-r.1   102627703   protein PHR1-LIKE 3-like 
 cit-r.1   102617659   protein PHR1-LIKE 3 
 gma-u.5   PHR35   MYB-CC domain-containing transcription factor PHR35 
 gma-u.5   PHR24   MYB-CC domain-containing transcription factor PHR24 
 gma-u.5   PHR13   MYB-CC domain-containing transcription factor PHR13 
 vvi-u.5   100253272   protein PHR1-LIKE 2 
 vvi-u.5   100250267   protein PHR1-LIKE 2 
 ppo-u.5   18106010   protein PHR1-LIKE 3 
 ppo-u.5   7461665   protein PHR1-LIKE 3 
 ppo-u.5   7461287   protein PHR1-LIKE 3 
 mtr-u.5   25484812   protein PHR1-LIKE 3 
 mtr-u.5   11407502   protein PHR1-LIKE 2 
 sly-u.5   101251768   protein PHR1-LIKE 3 
 sly-u.5   101263547   protein PHR1-LIKE 3-like 
 sly-u.5   101262095   protein PHR1-LIKE 3-like 
 sot-r.1   102586388   myb family transcription factor APL-like 
 sot-r.1   102590000   uncharacterized LOC102590000 
 sot-r.1   102605067   myb family transcription factor APL-like 
 nta-r.1   107828561   protein PHR1-LIKE 2-like 
 nta-r.1   107790657   protein PHR1-LIKE 3-like 
 nta-r.1   107790016   protein PHR1-LIKE 3-like 
 osa-u.5   4345340   protein PHR1-LIKE 3 
 osa-u.5   4346660   protein PHR1-LIKE 2 
 zma-u.5   100272614   uncharacterized LOC100272614 
 zma-u.5   100282824   myb family transcription factor-related protein 
 zma-u.5   100282682   myb family transcription factor-related protein 
 tae-r.2   123111660   protein PHR1-LIKE 2 
 tae-r.2   123121139   protein PHR1-LIKE 2 
 tae-r.2   123103457   protein PHR1-LIKE 2 
 hvu-r.1   123453061   protein PHR1-LIKE 2-like 
 sbi-r.1   8064667   protein PHR1-LIKE 3 
 bdi-r.1   100838525   protein PHR1-LIKE 2 
 bdi-r.1   100831869   protein PHR1-LIKE 2 

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Top 50 coexpressed genes to 107936319 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107936319 (ghi-r.1 coexpression data)

CoexMap"107936319"


ghiLOC107936319 | Entrez gene ID : 107936319    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 2 3 2 3 3 3 2 3 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016724506.1 [sequence] [blastp]
XP_016724507.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  cysk 1  (predict for XP_016724506.1)
nucl 7,  cysk 1,  cyto 1,  extr 1,  cysk_plas 1  (predict for XP_016724507.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016724506.1)
other 8  (predict for XP_016724507.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107936319
ghi-r.1
for
107927729
ghi-r.1
for
107914828
ghi-r.1
for
107963742
ath-u.5
for
AT3G24120
ath-u.5
for
UNE16
bra-r.6
for
103831963
bra-r.6
for
103828672
bra-r.6
for
103860014
bna-r.1
for
125600539
bna-r.1
for
106451495
bna-r.1
for
106434060
cit-r.1
for
102627703
cit-r.1
for
102617659
gma-u.5
for
PHR35
gma-u.5
for
PHR24
gma-u.5
for
PHR13
vvi-u.5
for
100253272
vvi-u.5
for
100250267
ppo-u.5
for
18106010
ppo-u.5
for
7461665
ppo-u.5
for
7461287
mtr-u.5
for
25484812
mtr-u.5
for
11407502
sly-u.5
for
101251768
sly-u.5
for
101263547
sly-u.5
for
101262095
sot-r.1
for
102586388
sot-r.1
for
102590000
sot-r.1
for
102605067
nta-r.1
for
107828561
nta-r.1
for
107790657
nta-r.1
for
107790016
osa-u.5
for
4345340
osa-u.5
for
4346660
zma-u.5
for
100272614
zma-u.5
for
100282824
zma-u.5
for
100282682
tae-r.2
for
123111660
tae-r.2
for
123121139
tae-r.2
for
123103457
hvu-r.1
for
123453061
sbi-r.1
for
8064667
bdi-r.1
for
100838525
bdi-r.1
for
100831869


Ortholog ID: 2908
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu sbi bdi bdi
Symbol LOC107936319 LOC107939362 LOC121206278 AT3G24120 UNE16 LOC103831963 LOC103828672 LOC103860014 LOC125600539 LOC106451495 LOC106434060 LOC102627703 LOC102617659 PHR35 PHR13 PHR18 LOC100253272 LOC100250267 LOC18106010 LOC7461665 LOC7461287 LOC25484812 LOC11407502 LOC101251768 LOC101263547 LOC101262095 LOC102586388 LOC102590000 LOC102605067 LOC107828561 LOC107790657 LOC107778664 LOC4345340 LOC4346660 LOC100272614 LOC100282824 LOC100282682 LOC123111660 LOC123121139 LOC123103457 LOC123453061 LOC8064667 LOC100838525 LOC100831869
Function* protein PHR1-LIKE 3 protein PHR1-LIKE 3 protein PHR1-LIKE 2 Homeodomain-like superfamily protein Homeodomain-like superfamily protein protein PHR1-LIKE 2 protein PHR1-LIKE 2 protein PHR1-LIKE 2 protein PHR1-LIKE 2-like protein PHR1-LIKE 2 protein PHR1-LIKE 2 protein PHR1-LIKE 3-like protein PHR1-LIKE 3 MYB-CC domain-containing transcription factor PHR35 MYB-CC domain-containing transcription factor PHR13 MYB-CC domain-containing transcription factor PHR18 protein PHR1-LIKE 2 protein PHR1-LIKE 2 protein PHR1-LIKE 3 protein PHR1-LIKE 3 protein PHR1-LIKE 3 protein PHR1-LIKE 3 protein PHR1-LIKE 2 protein PHR1-LIKE 3 protein PHR1-LIKE 3-like protein PHR1-LIKE 3-like myb family transcription factor APL-like uncharacterized LOC102590000 myb family transcription factor APL-like protein PHR1-LIKE 2-like protein PHR1-LIKE 3-like protein PHR1-LIKE 3 protein PHR1-LIKE 3 protein PHR1-LIKE 2 uncharacterized LOC100272614 myb family transcription factor-related protein myb family transcription factor-related protein protein PHR1-LIKE 2 protein PHR1-LIKE 2 protein PHR1-LIKE 2 protein PHR1-LIKE 2-like protein PHR1-LIKE 3 protein PHR1-LIKE 2 protein PHR1-LIKE 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna00310 Lysine degradation 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 4
vvi04120 Ubiquitin mediated proteolysis 3
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 2
ppo04136 Autophagy - other 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00905 Brassinosteroid biosynthesis 3
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 3
sly04141 Protein processing in endoplasmic reticulum 3
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 4
sot04136 Autophagy - other 4
sot04382 Cornified envelope formation 4
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 3
nta01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 3
nta01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107936319 107939362 121206278 821998 826998 103831963 103828672 103860014 125600539 106451495 106434060 102627703 102617659 100811831 100782369 100779871 100253272 100250267 18106010 7461665 7461287 25484812 11407502 101251768 101263547 101262095 102586388 102590000 102605067 107828561 107790657 107778664 4345340 4346660 100272614 100282824 100282682 123111660 123121139 123103457 123453061 8064667 100838525 100831869
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