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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100250558   uncharacterized LOC100250558 
 vvi-r.5   100250558   uncharacterized LOC100250558 
 vvi-u.5   100854962   uncharacterized LOC100854962 
 vvi-u.5   100260435   uncharacterized LOC100260435 
 ath-u.5   AT4G36420   Ribosomal protein L12 family protein 
 ath-u.5   AT4G37660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 gma-u.5   100805664   50S ribosomal protein L7/L12 
 gma-u.5   100794355   50S ribosomal protein L7/L12-like 
 gma-u.5   100790626   50S ribosomal protein L7/L12 
 bra-r.6   103830893   50S ribosomal protein L7/L12 
 bra-r.6   103862469   50S ribosomal protein L7/L12 
 ppo-u.5   18098322   uncharacterized LOC18098322 
 ppo-u.5   7461968   uncharacterized LOC7461968 
 ppo-u.5   7480147   uncharacterized LOC7480147 
 mtr-u.5   25486345   50S ribosomal protein L7/L12 
 mtr-u.5   25498199   50S ribosomal protein L7/L12 
 mtr-u.5   11410295   50S ribosomal protein L7/L12 
 ghi-r.1   121222421   50S ribosomal protein L7/L12 
 ghi-r.1   107938483   50S ribosomal protein L7/L12 
 ghi-r.1   107914346   50S ribosomal protein L7/L12 
 bna-r.1   106426861   50S ribosomal protein L7/L12-like 
 bna-r.1   106353945   50S ribosomal protein L7/L12 
 cit-r.1   102625007   uncharacterized LOC102625007 
 cit-r.1   102620497   uncharacterized LOC102620497 
 cit-r.1   102620769   uncharacterized LOC102620769 
 sly-u.5   101255363   uncharacterized LOC101255363 
 sly-u.5   101249313   uncharacterized LOC101249313 
 sly-u.5   101262273   uncharacterized LOC101262273 
 sot-r.1   102591755   50S ribosomal protein L7/L12-like 
 sot-r.1   102579278   50S ribosomal protein L7/L12 
 sot-r.1   102588825   50S ribosomal protein L7/L12 
 nta-r.1   107829458   uncharacterized LOC107829458 
 nta-r.1   107761323   uncharacterized LOC107761323 
 nta-r.1   107764675   uncharacterized LOC107764675 
 osa-u.5   4343966   uncharacterized LOC4343966 
 osa-u.5   4339552   uncharacterized LOC4339552 
 osa-u.5   4334016   uncharacterized LOC4334016 
 zma-u.5   100194209   Ribosomal protein L7/L12-like 
 zma-u.5   100284007   50S ribosomal protein L12-2 
 zma-u.5   100283458   50S ribosomal protein L12-2 
 tae-r.2   123086965   50S ribosomal protein L7/L12 
 tae-r.2   123096021   50S ribosomal protein L7/L12 
 tae-r.2   123091011   50S ribosomal protein L7/L12 
 hvu-r.1   123425223   50S ribosomal protein L7/L12 
 hvu-r.1   123447688   50S ribosomal protein L7/L12-like 
 hvu-r.1   123449570   50S ribosomal protein L7/L12-like 
 sbi-r.1   8059939   50S ribosomal protein L7/L12 
 bdi-r.1   100834104   50S ribosomal protein L7/L12 
 bdi-r.1   100837964   50S ribosomal protein L7/L12 
 bdi-r.1   100846766   50S ribosomal protein L7/L12 
 cre-r.1   CHLRE_06g293700v5   uncharacterized protein 

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Top 50 coexpressed genes to 100250558 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100250558 (vvi-u.5 coexpression data)

CoexMap"100250558"


vviLOC100250558 | Entrez gene ID : 100250558      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 2 3 3 3 2 3 3 3 3 3 3 3 3 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03010 [list] [network] Ribosome (544 genes)
GO BP
GO:0006412 [list] [network] translation  (410 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (293 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (288 genes)  IEA  
Protein XP_019074705.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_019074705.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_019074705.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100250558
vvi-r.5
for
100250558
vvi-u.5
for
100854962
vvi-u.5
for
100260435
ath-u.5
for
AT4G36420
ath-u.5
for
AT4G37660
gma-u.5
for
100805664
gma-u.5
for
100794355
gma-u.5
for
100790626
bra-r.6
for
103830893
bra-r.6
for
103862469
ppo-u.5
for
18098322
ppo-u.5
for
7461968
ppo-u.5
for
7480147
mtr-u.5
for
25486345
mtr-u.5
for
25498199
mtr-u.5
for
11410295
ghi-r.1
for
121222421
ghi-r.1
for
107938483
ghi-r.1
for
107914346
bna-r.1
for
106426861
bna-r.1
for
106353945
cit-r.1
for
102625007
cit-r.1
for
102620497
cit-r.1
for
102620769
sly-u.5
for
101255363
sly-u.5
for
101249313
sly-u.5
for
101262273
sot-r.1
for
102591755
sot-r.1
for
102579278
sot-r.1
for
102588825
nta-r.1
for
107829458
nta-r.1
for
107761323
nta-r.1
for
107764675
osa-u.5
for
4343966
osa-u.5
for
4339552
osa-u.5
for
4334016
zma-u.5
for
100194209
zma-u.5
for
100284007
zma-u.5
for
100283458
tae-r.2
for
123086965
tae-r.2
for
123096021
tae-r.2
for
123091011
hvu-r.1
for
123425223
hvu-r.1
for
123447688
hvu-r.1
for
123449570
sbi-r.1
for
8059939
bdi-r.1
for
100834104
bdi-r.1
for
100837964
bdi-r.1
for
100846766
cre-r.1
for
CHLRE_06g293700v5


Ortholog ID: 1368
Species vvi vvi vvi ath ath ath gma gma gma bra bra ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna cit cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi bdi bdi bdi cre
Symbol LOC100250558 LOC100854962 LOC100260435 AT4G36420 AT4G37660 AT1G70190 LOC100805664 LOC100790626 LOC100819312 LOC103830893 LOC103862569 LOC18098322 LOC7461968 LOC7480147 LOC25486345 LOC25498199 LOC25486908 LOC121222421 LOC107914346 LOC107913043 LOC106353945 LOC106410794 LOC102625007 LOC102620497 LOC102620769 LOC101255363 LOC101249313 LOC101262273 LOC102591755 LOC102579278 LOC102588825 LOC107761323 LOC107796339 LOC142171575 LOC4343966 LOC4339552 LOC4334016 LOC100284007 LOC100283458 LOC100286104 LOC123086965 LOC123091011 LOC123044137 LOC123425223 LOC123447688 LOC123449570 LOC8059939 LOC100834104 LOC100837964 LOC100846766 CHLRE_06g293700v5
Function* uncharacterized LOC100250558 uncharacterized LOC100854962 uncharacterized LOC100260435 Ribosomal protein L12 family protein Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ribosomal protein L7/L12 domain-containing protein 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 uncharacterized LOC18098322 uncharacterized LOC7461968 uncharacterized LOC7480147 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12-like uncharacterized LOC102625007 uncharacterized LOC102620497 uncharacterized LOC102620769 uncharacterized LOC101255363 uncharacterized LOC101249313 uncharacterized LOC101262273 50S ribosomal protein L7/L12-like 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 uncharacterized LOC107761323 uncharacterized LOC107796339 uncharacterized LOC142171575 uncharacterized LOC4343966 uncharacterized LOC4339552 uncharacterized LOC4334016 50S ribosomal protein L12-2 50S ribosomal protein L12-2 39S ribosomal protein L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12-like 50S ribosomal protein L7/L12-like 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 3
bra03010 Ribosome 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03008 Ribosome biogenesis in eukaryotes 3
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 10
nta00480 Glutathione metabolism 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 10
nta00480 Glutathione metabolism 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta03013 Nucleocytoplasmic transport 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03010 Ribosome 2
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100250558 100854962 100260435 829794 829920 843355 100805664 100790626 100819312 103830893 103862569 18098322 7461968 7480147 25486345 25498199 25486908 121222421 107914346 107913043 106353945 106410794 102625007 102620497 102620769 101255363 101249313 101262273 102591755 102579278 102588825 107761323 107796339 142171575 4343966 4339552 4334016 100284007 100283458 100286104 123086965 123091011 123044137 123425223 123447688 123449570 8059939 100834104 100837964 100846766 5727110
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