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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G37660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 ath-r.7   AT4G37660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 ath-m.9   AT4G37660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 ath-e.2   AT4G37660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 ath-m.4.bio   AT4G37660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 ath-m.4.hor   AT4G37660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 ath-m.4.lig   AT4G37660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 ath-m.4.str   AT4G37660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 ath-m.4.tis   AT4G37660   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 ath-u.5   AT4G36420   Ribosomal protein L12 family protein 
 ath-u.5   AT1G70190   ribosomal protein L7/L12 domain-containing protein 
 bra-r.6   103862469   50S ribosomal protein L7/L12 
 bra-r.6   103862569   50S ribosomal protein L7/L12 
 bna-r.1   106407063   50S ribosomal protein L7/L12 
 bna-r.1   125603704   50S ribosomal protein L7/L12-like 
 bna-r.1   106410794   50S ribosomal protein L7/L12-like 
 ghi-r.1   107913043   50S ribosomal protein L7/L12 
 ghi-r.1   107896691   50S ribosomal protein L7/L12 
 ghi-r.1   107938483   50S ribosomal protein L7/L12 
 cit-r.1   102625007   uncharacterized LOC102625007 
 cit-r.1   102620497   uncharacterized LOC102620497 
 cit-r.1   102620769   uncharacterized LOC102620769 
 gma-u.5   100819312   50S ribosomal protein L7/L12 
 gma-u.5   100775592   50S ribosomal protein L7/L12 
 gma-u.5   100783589   50S ribosomal protein L7/L12 
 vvi-u.5   100854962   uncharacterized LOC100854962 
 vvi-u.5   100250558   uncharacterized LOC100250558 
 vvi-u.5   100260435   uncharacterized LOC100260435 
 ppo-u.5   7480147   uncharacterized LOC7480147 
 ppo-u.5   18098322   uncharacterized LOC18098322 
 ppo-u.5   7461968   uncharacterized LOC7461968 
 mtr-u.5   25486345   50S ribosomal protein L7/L12 
 mtr-u.5   25486908   50S ribosomal protein L7/L12 
 mtr-u.5   25498199   50S ribosomal protein L7/L12 
 sly-u.5   101263560   uncharacterized LOC101263560 
 sly-u.5   101255363   uncharacterized LOC101255363 
 sly-u.5   101249313   uncharacterized LOC101249313 
 sot-r.1   102591755   50S ribosomal protein L7/L12-like 
 sot-r.1   102596272   50S ribosomal protein L7/L12-like 
 sot-r.1   102588825   50S ribosomal protein L7/L12 
 nta-r.1   107829458   uncharacterized LOC107829458 
 nta-r.1   107761323   uncharacterized LOC107761323 
 nta-r.1   107764675   uncharacterized LOC107764675 
 osa-u.5   4334016   uncharacterized LOC4334016 
 osa-u.5   4339552   uncharacterized LOC4339552 
 osa-u.5   4343966   uncharacterized LOC4343966 
 zma-u.5   100286104   39S ribosomal protein L12 
 zma-u.5   100284007   50S ribosomal protein L12-2 
 zma-u.5   100283458   50S ribosomal protein L12-2 
 tae-r.2   123091011   50S ribosomal protein L7/L12 
 tae-r.2   123086965   50S ribosomal protein L7/L12 
 tae-r.2   123096021   50S ribosomal protein L7/L12 
 hvu-r.1   123449570   50S ribosomal protein L7/L12-like 
 hvu-r.1   123425223   50S ribosomal protein L7/L12 
 hvu-r.1   123447688   50S ribosomal protein L7/L12-like 
 sbi-r.1   8059939   50S ribosomal protein L7/L12 
 bdi-r.1   100834104   50S ribosomal protein L7/L12 
 bdi-r.1   100837964   50S ribosomal protein L7/L12 
 bdi-r.1   100846766   50S ribosomal protein L7/L12 
 cre-r.1   CHLRE_06g293700v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G37660 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G37660 (ath-u.5 coexpression data)

CoexMap"829920"


athAT4G37660 | Entrez gene ID : 829920      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_195481.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_195481.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_195481.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G37660
ath-r.7
for
AT4G37660
ath-m.9
for
AT4G37660
ath-e.2
for
AT4G37660
ath-m.4.bio
for
AT4G37660
ath-m.4.hor
for
AT4G37660
ath-m.4.lig
for
AT4G37660
ath-m.4.str
for
AT4G37660
ath-m.4.tis
for
AT4G37660
ath-u.5
for
AT4G36420
ath-u.5
for
AT1G70190
bra-r.6
for
103862469
bra-r.6
for
103862569
bna-r.1
for
106407063
bna-r.1
for
125603704
bna-r.1
for
106410794
ghi-r.1
for
107913043
ghi-r.1
for
107896691
ghi-r.1
for
107938483
cit-r.1
for
102625007
cit-r.1
for
102620497
cit-r.1
for
102620769
gma-u.5
for
100819312
gma-u.5
for
100775592
gma-u.5
for
100783589
vvi-u.5
for
100854962
vvi-u.5
for
100250558
vvi-u.5
for
100260435
ppo-u.5
for
7480147
ppo-u.5
for
18098322
ppo-u.5
for
7461968
mtr-u.5
for
25486345
mtr-u.5
for
25486908
mtr-u.5
for
25498199
sly-u.5
for
101263560
sly-u.5
for
101255363
sly-u.5
for
101249313
sot-r.1
for
102591755
sot-r.1
for
102596272
sot-r.1
for
102588825
nta-r.1
for
107829458
nta-r.1
for
107761323
nta-r.1
for
107764675
osa-u.5
for
4334016
osa-u.5
for
4339552
osa-u.5
for
4343966
zma-u.5
for
100286104
zma-u.5
for
100284007
zma-u.5
for
100283458
tae-r.2
for
123091011
tae-r.2
for
123086965
tae-r.2
for
123096021
hvu-r.1
for
123449570
hvu-r.1
for
123425223
hvu-r.1
for
123447688
sbi-r.1
for
8059939
bdi-r.1
for
100834104
bdi-r.1
for
100837964
bdi-r.1
for
100846766
cre-r.1
for
CHLRE_06g293700v5


Ortholog ID: 1368
Species ath ath ath bra bra bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi bdi bdi bdi cre
Symbol AT4G37660 AT4G36420 AT1G70190 LOC103862569 LOC103830893 LOC106410794 LOC106353945 LOC107913043 LOC121222421 LOC107914346 LOC102625007 LOC102620497 LOC102620769 LOC100819312 LOC100790626 LOC100805664 LOC100854962 LOC100250558 LOC100260435 LOC7480147 LOC18098322 LOC7461968 LOC25486345 LOC25486908 LOC25498199 LOC101255363 LOC101249313 LOC101262273 LOC102591755 LOC102588825 LOC102579278 LOC107761323 LOC107796339 LOC142171575 LOC4334016 LOC4339552 LOC4343966 LOC100286104 LOC100284007 LOC100283458 LOC123091011 LOC123086965 LOC123044137 LOC123449570 LOC123425223 LOC123447688 LOC8059939 LOC100834104 LOC100837964 LOC100846766 CHLRE_06g293700v5
Function* Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein Ribosomal protein L12 family protein ribosomal protein L7/L12 domain-containing protein 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12-like 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 uncharacterized LOC102625007 uncharacterized LOC102620497 uncharacterized LOC102620769 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 uncharacterized LOC100854962 uncharacterized LOC100250558 uncharacterized LOC100260435 uncharacterized LOC7480147 uncharacterized LOC18098322 uncharacterized LOC7461968 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 uncharacterized LOC101255363 uncharacterized LOC101249313 uncharacterized LOC101262273 50S ribosomal protein L7/L12-like 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 uncharacterized LOC107761323 uncharacterized LOC107796339 uncharacterized LOC142171575 uncharacterized LOC4334016 uncharacterized LOC4339552 uncharacterized LOC4343966 39S ribosomal protein L12 50S ribosomal protein L12-2 50S ribosomal protein L12-2 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12-like 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12-like 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 3
bra03010 Ribosome 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03008 Ribosome biogenesis in eukaryotes 3
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 10
nta00480 Glutathione metabolism 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 10
nta00480 Glutathione metabolism 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta03013 Nucleocytoplasmic transport 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03010 Ribosome 2
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829920 829794 843355 103862569 103830893 106410794 106353945 107913043 121222421 107914346 102625007 102620497 102620769 100819312 100790626 100805664 100854962 100250558 100260435 7480147 18098322 7461968 25486345 25486908 25498199 101255363 101249313 101262273 102591755 102588825 102579278 107761323 107796339 142171575 4334016 4339552 4343966 100286104 100284007 100283458 123091011 123086965 123044137 123449570 123425223 123447688 8059939 100834104 100837964 100846766 5727110
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