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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100250842   probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic 
 vvi-r.5   100250842   probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic 
 ath-u.5   CRR3   chlororespiratory reduction 3 
 gma-u.5   100810981   probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic 
 ppo-u.5   7459771   probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic 
 mtr-u.5   11424254   probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic 
 sly-u.5   101243784   uncharacterized LOC101243784 
 osa-u.5   107275295   probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic 
 zma-u.5   100275885   putative NAD(P)H dehydrogenase subunit CRR3 chloroplastic 

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Top 50 coexpressed genes to 100250842 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100250842 (vvi-u.5 coexpression data)

CoexMap"100250842"


vviLOC100250842 | Entrez gene ID : 100250842      
Species vvi ath gma ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (8 genes)  IEA  
GO CC
GO:0010598 [list] [network] NAD(P)H dehydrogenase complex (plastoquinone)  (5 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (82 genes)  IEA  
GO MF
Protein XP_002284679.4 [sequence] [blastp]
Subcellular
localization
wolf
golg 4,  nucl 1,  cyto 1,  cyto_nucl 1,  mito 1,  plas 1,  vacu 1,  pero 1,  cysk 1,  cysk_plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_002284679.4)
Subcellular
localization
TargetP
other 4  (predict for XP_002284679.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100250842

.
vvi-r.5
for
100250842

.
ath-u.5
for
CRR3

.
gma-u.5
for
100810981

.
ppo-u.5
for
7459771

.
mtr-u.5
for
11424254

.
sly-u.5
for
101243784

.
osa-u.5
for
107275295

.
zma-u.5
for
100275885

.


Ortholog ID: 8378
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CRR3 LOC100810981 LOC101243784 LOC107275295 LOC100275885 LOC103854057 LOC100250842 LOC7459771 LOC11424254 LOC123121163 LOC123103463 LOC123398489 LOC121202995 LOC107948906 LOC106374776 LOC125587885 LOC8071883 LOC102601753 LOC102618097 LOC100842901 LOC107767152 LOC107789980
Function* chlororespiratory reduction 3 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic uncharacterized LOC101243784 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic putative NAD(P)H dehydrogenase subunit CRR3 chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic putative NAD(P)H dehydrogenase subunit CRR3, chloroplastic putative NAD(P)H dehydrogenase subunit CRR3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra00195 Photosynthesis 2
bra00260 Glycine, serine and threonine metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04122 Sulfur relay system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814688 100810981 101243784 107275295 100275885 103854057 100250842 7459771 11424254 123121163 123103463 123398489 121202995 107948906 106374776 125587885 8071883 102601753 102618097 100842901 107767152 107789980
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