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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100251286   methionine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-r.5   100251286   methionine--tRNA ligase, chloroplastic/mitochondrial 
 ath-u.5   OVA1   methionyl-tRNA synthetase / methionine-tRNA ligase / MetRS (cpMetRS) 
 gma-u.5   100818412   methionine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100814644   methionine--tRNA ligase, chloroplastic/mitochondrial 
 bra-r.6   103841446   methionine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7489580   methionine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   25485698   methionine--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107938201   methionine--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107897824   methionine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106414261   methionine--tRNA ligase, chloroplastic/mitochondrial-like 
 bna-r.1   111212405   methionine--tRNA ligase, chloroplastic/mitochondrial 
 cit-r.1   102613489   methionine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101260937   methionine--tRNA ligase, chloroplastic/mitochondrial 
 sot-r.1   102605729   methionine--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107827843   methionine--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107821561   methionine--tRNA ligase, chloroplastic/mitochondrial-like 
 osa-u.5   4332018   methionine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   103631953   methionine--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123098306   methionine--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123093021   methionine--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123085031   methionine--tRNA ligase, chloroplastic/mitochondrial 
 hvu-r.1   123449359   methionine--tRNA ligase, chloroplastic/mitochondrial 
 sbi-r.1   8081851   methionine--tRNA ligase, chloroplastic/mitochondrial 
 bdi-r.1   100843706   methionine--tRNA ligase, chloroplastic/mitochondrial 
 cre-r.1   CHLRE_12g487100v5   uncharacterized protein 

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Top 50 coexpressed genes to 100251286 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100251286 (vvi-u.5 coexpression data)

CoexMap"100251286"


vviLOC100251286 | Entrez gene ID : 100251286      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00450 [list] [network] Selenocompound metabolism (14 genes)
vvi00970 [list] [network] Aminoacyl-tRNA biosynthesis (494 genes)
GO BP
GO:0006431 [list] [network] methionyl-tRNA aminoacylation  (3 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (103 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (505 genes)  IEA  
GO MF
GO:0004825 [list] [network] methionine-tRNA ligase activity  (3 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2120 genes)  IEA  
Protein XP_002279143.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002279143.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002279143.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100251286
vvi-r.5
for
100251286
ath-u.5
for
OVA1
gma-u.5
for
100818412
gma-u.5
for
100814644
bra-r.6
for
103841446
ppo-u.5
for
7489580
mtr-u.5
for
25485698
ghi-r.1
for
107938201
ghi-r.1
for
107897824
bna-r.1
for
106414261
bna-r.1
for
111212405
cit-r.1
for
102613489
sly-u.5
for
101260937
sot-r.1
for
102605729
nta-r.1
for
107827843
nta-r.1
for
107821561
osa-u.5
for
4332018
zma-u.5
for
103631953
tae-r.2
for
123098306
tae-r.2
for
123093021
tae-r.2
for
123085031
hvu-r.1
for
123449359
sbi-r.1
for
8081851
bdi-r.1
for
100843706
cre-r.1
for
CHLRE_12g487100v5


Ortholog ID: 9541
Species vvi ath gma gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100251286 OVA1 LOC100818412 LOC100814644 LOC103841446 LOC7489580 LOC25485698 LOC107938201 LOC107897824 LOC106414261 LOC111212405 LOC102613489 LOC101260937 LOC102605729 LOC107827843 LOC107821561 LOC4332018 LOC103631953 LOC123098306 LOC123093021 LOC123085031 LOC123449359 LOC8081851 LOC100843706 CHLRE_12g487100v5
Function* methionine--tRNA ligase, chloroplastic/mitochondrial methionyl-tRNA synthetase / methionine-tRNA ligase / MetRS (cpMetRS) methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial-like methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial-like methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial methionine--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
ath00261 Monobactam biosynthesis 2
ath00300 Lysine biosynthesis 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00450 Selenocompound metabolism 2
gma03040 Spliceosome 2
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00770 Pantothenate and CoA biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00770 Pantothenate and CoA biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta00450 Selenocompound metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 10
tae00450 Selenocompound metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100251286 824706 100818412 100814644 103841446 7489580 25485698 107938201 107897824 106414261 111212405 102613489 101260937 102605729 107827843 107821561 4332018 103631953 123098306 123093021 123085031 123449359 8081851 100843706 5716638
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