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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100252393   pentatricopeptide repeat-containing protein At5g27460 
 vvi-r.5   100252393   pentatricopeptide repeat-containing protein At5g27460 
 vvi-m.5   100252393   pentatricopeptide repeat-containing protein At5g27460 
 ath-u.5   AT5G27460   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100803685   pentatricopeptide repeat-containing protein At5g27460 
 gma-u.5   100813805   pentatricopeptide repeat-containing protein At5g27460 
 ppo-u.5   18099534   pentatricopeptide repeat-containing protein At5g27460 
 mtr-u.5   25489901   pentatricopeptide repeat-containing protein At5g27460 
 sly-u.5   101258594   pentatricopeptide repeat-containing protein At5g27460 
 osa-u.5   4331007   pentatricopeptide repeat-containing protein At5g27460 
 zma-u.5   100272948   Pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 100252393 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100252393 (vvi-u.5 coexpression data)

CoexMap"100252393"


vviLOC100252393 | Entrez gene ID : 100252393      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (505 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002283946.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  cyto_mito 2  (predict for XP_002283946.2)
Subcellular
localization
TargetP
mito 8  (predict for XP_002283946.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100252393
vvi-r.5
for
100252393
vvi-m.5
for
100252393
ath-u.5
for
AT5G27460
gma-u.5
for
100803685
gma-u.5
for
100813805
ppo-u.5
for
18099534
mtr-u.5
for
25489901
sly-u.5
for
101258594
osa-u.5
for
4331007
zma-u.5
for
100272948


Ortholog ID: 7739
Species vvi ath gma gma bra bra ppo mtr ghi ghi bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100252393 AT5G27460 LOC100803685 LOC100813805 LOC103854659 LOC103837183 LOC18099534 LOC25489901 LOC107957796 LOC107905070 LOC125581864 LOC102610257 LOC101258594 LOC102590124 LOC107764066 LOC107816087 LOC4331007 LOC100272948 LOC123139123 LOC123145909 LOC123404390 LOC8056388 LOC100828396
Function* pentatricopeptide repeat-containing protein At5g27460 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460-like pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460-like pentatricopeptide repeat-containing protein At5g27460-like pentatricopeptide repeat-containing protein At5g27460 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100252393 832805 100803685 100813805 103854659 103837183 18099534 25489901 107957796 107905070 125581864 102610257 101258594 102590124 107764066 107816087 4331007 100272948 123139123 123145909 123404390 8056388 100828396
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