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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100272948   Pentatricopeptide repeat-containing protein 
 zma-r.6   100272948   Pentatricopeptide repeat-containing protein 
 sbi-r.1   8056388   pentatricopeptide repeat-containing protein At5g27460 
 osa-u.5   4331007   pentatricopeptide repeat-containing protein At5g27460 
 tae-r.2   123128773   pentatricopeptide repeat-containing protein At5g27460 
 tae-r.2   123139123   pentatricopeptide repeat-containing protein At5g27460 
 tae-r.2   123145909   pentatricopeptide repeat-containing protein At5g27460 
 hvu-r.1   123404390   pentatricopeptide repeat-containing protein At5g27460 
 bdi-r.1   100828396   pentatricopeptide repeat-containing protein At5g27460 
 ath-u.5   AT5G27460   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100803685   pentatricopeptide repeat-containing protein At5g27460 
 gma-u.5   100813805   pentatricopeptide repeat-containing protein At5g27460 
 sly-u.5   101258594   pentatricopeptide repeat-containing protein At5g27460 
 bra-r.6   103854659   pentatricopeptide repeat-containing protein At5g27460 
 bra-r.6   103837183   pentatricopeptide repeat-containing protein At5g27460 
 vvi-u.5   100252393   pentatricopeptide repeat-containing protein At5g27460 
 ppo-u.5   18099534   pentatricopeptide repeat-containing protein At5g27460 
 mtr-u.5   25489901   pentatricopeptide repeat-containing protein At5g27460 
 ghi-r.1   107905070   pentatricopeptide repeat-containing protein At5g27460 
 ghi-r.1   107957796   pentatricopeptide repeat-containing protein At5g27460 
 bna-r.1   125581864   pentatricopeptide repeat-containing protein At5g27460-like 
 bna-r.1   125593283   pentatricopeptide repeat-containing protein At5g27460-like 
 sot-r.1   102590124   pentatricopeptide repeat-containing protein At5g27460 
 cit-r.1   102610257   pentatricopeptide repeat-containing protein At5g27460 
 nta-r.1   107816087   pentatricopeptide repeat-containing protein At5g27460-like 
 nta-r.1   107764066   pentatricopeptide repeat-containing protein At5g27460-like 

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Top 50 coexpressed genes to 100272948 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100272948 (zma-u.5 coexpression data)

CoexMap"100272948"


zmaLOC100272948 | Entrez gene ID : 100272948      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 3 1 1 1 2 1 2 1 1 1 2 2 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (746 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001140872.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001140872.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for NP_001140872.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100272948
zma-r.6
for
100272948
sbi-r.1
for
8056388
osa-u.5
for
4331007
tae-r.2
for
123128773
tae-r.2
for
123139123
tae-r.2
for
123145909
hvu-r.1
for
123404390
bdi-r.1
for
100828396
ath-u.5
for
AT5G27460
gma-u.5
for
100803685
gma-u.5
for
100813805
sly-u.5
for
101258594
bra-r.6
for
103854659
bra-r.6
for
103837183
vvi-u.5
for
100252393
ppo-u.5
for
18099534
mtr-u.5
for
25489901
ghi-r.1
for
107905070
ghi-r.1
for
107957796
bna-r.1
for
125581864
bna-r.1
for
125593283
sot-r.1
for
102590124
cit-r.1
for
102610257
nta-r.1
for
107816087
nta-r.1
for
107764066


Ortholog ID: 7739
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna sot cit nta nta
Symbol LOC100272948 LOC8056388 LOC4331007 LOC123128773 LOC123139123 LOC123145909 LOC123404390 LOC100828396 AT5G27460 LOC100803685 LOC100813805 LOC101258594 LOC103854659 LOC103837183 LOC100252393 LOC18099534 LOC25489901 LOC107905070 LOC107957796 LOC125581864 LOC102590124 LOC102610257 LOC107816087 LOC107764066
Function* Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460-like pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460 pentatricopeptide repeat-containing protein At5g27460-like pentatricopeptide repeat-containing protein At5g27460-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100272948 8056388 4331007 123128773 123139123 123145909 123404390 100828396 832805 100803685 100813805 101258594 103854659 103837183 100252393 18099534 25489901 107905070 107957796 125581864 102590124 102610257 107816087 107764066
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