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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100252623   RING finger and CHY zinc finger domain-containing protein 1-like 
 vvi-r.5   100252623   RING finger and CHY zinc finger domain-containing protein 1-like 
 vvi-m.5   100252623   RING finger and CHY zinc finger domain-containing protein 1-like 
 vvi-u.5   100258546   E3 ubiquitin-protein ligase RZFP34 
 vvi-u.5   100241783   E3 ubiquitin-protein ligase RZFP34 
 ath-u.5   AT5G22920   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 ath-u.5   AT5G25560   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 gma-u.5   100803569   probable E3 ubiquitin-protein ligase RZFP34 
 gma-u.5   100812023   C2H2-Zn transcription factor 
 gma-u.5   100812709   E3 ubiquitin-protein ligase RZFP34 
 bra-r.6   103856536   E3 ubiquitin-protein ligase RZFP34 
 bra-r.6   103854743   probable E3 ubiquitin-protein ligase RZFP34 
 ppo-u.5   7463321   E3 ubiquitin-protein ligase RZFP34 
 ppo-u.5   7495732   probable E3 ubiquitin-protein ligase RZFP34 
 mtr-u.5   11412063   E3 ubiquitin-protein ligase RZFP34 
 mtr-u.5   25499342   E3 ubiquitin-protein ligase RZFP34 
 mtr-u.5   25483138   E3 ubiquitin-protein ligase RZFP34 
 ghi-r.1   107899485   E3 ubiquitin-protein ligase RZFP34 
 ghi-r.1   107938017   probable E3 ubiquitin-protein ligase RZFP34 
 ghi-r.1   107948601   E3 ubiquitin-protein ligase RZFP34 
 bna-r.1   106382650   probable E3 ubiquitin-protein ligase RZFP34 
 bna-r.1   106386914   E3 ubiquitin-protein ligase RZFP34-like 
 bna-r.1   106419516   E3 ubiquitin-protein ligase RZFP34 
 cit-r.1   102624116   probable E3 ubiquitin-protein ligase RZFP34 
 cit-r.1   102627698   E3 ubiquitin-protein ligase RZFP34 
 sly-u.5   101254223   probable E3 ubiquitin-protein ligase RZFP34 
 sly-u.5   101256801   RING finger and CHY zinc finger domain-containing protein 
 sot-r.1   102585180   E3 ubiquitin-protein ligase MIEL1 
 sot-r.1   102582766   E3 ubiquitin-protein ligase MIEL1 
 nta-r.1   107814327   E3 ubiquitin-protein ligase RZFP34 
 nta-r.1   107817603   E3 ubiquitin-protein ligase RZFP34 
 nta-r.1   107794025   E3 ubiquitin-protein ligase RZFP34 
 osa-u.5   4348796   E3 ubiquitin-protein ligase RZFP34 
 osa-u.5   4324695   probable E3 ubiquitin-protein ligase RZFP34 
 zma-u.5   100192089   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 zma-u.5   100192978   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 zma-u.5   100280509   RING finger and CHY zinc finger domain-containing protein 1 
 tae-r.2   123119530   E3 ubiquitin-protein ligase RZFP34 
 tae-r.2   123062052   probable E3 ubiquitin-protein ligase RZFP34 
 tae-r.2   123079165   probable E3 ubiquitin-protein ligase RZFP34 
 hvu-r.1   123444288   probable E3 ubiquitin-protein ligase RZFP34 
 hvu-r.1   123430073   E3 ubiquitin-protein ligase RZFP34-like 
 sbi-r.1   8070528   E3 ubiquitin-protein ligase MIEL1 
 sbi-r.1   8085486   E3 ubiquitin-protein ligase MIEL1 
 sbi-r.1   110433580   E3 ubiquitin-protein ligase MIEL1-like 
 bdi-r.1   100826237   probable E3 ubiquitin-protein ligase RZFP34 
 bdi-r.1   100822563   E3 ubiquitin-protein ligase RZFP34 
 bdi-r.1   100830866   E3 ubiquitin-protein ligase RZFP34 

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Top 50 coexpressed genes to 100252623 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100252623 (vvi-u.5 coexpression data)

CoexMap"100252623"


vviLOC100252623 | Entrez gene ID : 100252623      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 2 3 2 2 3 3 3 2 2 2 3 2 3 3 2 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi04120 [list] [network] Ubiquitin mediated proteolysis (130 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (244 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (272 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (166 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
Protein XP_002284652.1 [sequence] [blastp]
XP_010648582.1 [sequence] [blastp]
XP_010648583.1 [sequence] [blastp]
XP_059592192.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_002284652.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_010648582.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_010648583.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_059592192.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002284652.1)
other 8  (predict for XP_010648582.1)
other 8  (predict for XP_010648583.1)
other 8  (predict for XP_059592192.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100252623
vvi-r.5
for
100252623
vvi-m.5
for
100252623
vvi-u.5
for
100258546
vvi-u.5
for
100241783
ath-u.5
for
AT5G22920
ath-u.5
for
AT5G25560
gma-u.5
for
100803569
gma-u.5
for
100812023
gma-u.5
for
100812709
bra-r.6
for
103856536
bra-r.6
for
103854743
ppo-u.5
for
7463321
ppo-u.5
for
7495732
mtr-u.5
for
11412063
mtr-u.5
for
25499342
mtr-u.5
for
25483138
ghi-r.1
for
107899485
ghi-r.1
for
107938017
ghi-r.1
for
107948601
bna-r.1
for
106382650
bna-r.1
for
106386914
bna-r.1
for
106419516
cit-r.1
for
102624116
cit-r.1
for
102627698
sly-u.5
for
101254223
sly-u.5
for
101256801
sot-r.1
for
102585180
sot-r.1
for
102582766
nta-r.1
for
107814327
nta-r.1
for
107817603
nta-r.1
for
107794025
osa-u.5
for
4348796
osa-u.5
for
4324695
zma-u.5
for
100192089
zma-u.5
for
100192978
zma-u.5
for
100280509
tae-r.2
for
123119530
tae-r.2
for
123062052
tae-r.2
for
123079165
hvu-r.1
for
123444288
hvu-r.1
for
123430073
sbi-r.1
for
8070528
sbi-r.1
for
8085486
sbi-r.1
for
110433580
bdi-r.1
for
100826237
bdi-r.1
for
100822563
bdi-r.1
for
100830866


Ortholog ID: 2581
Species vvi vvi vvi ath ath gma gma gma bra bra ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC100252623 LOC100258546 LOC100241783 AT5G22920 AT5G25560 LOC100812709 LOC100783915 LOC100802067 LOC103856536 LOC103854743 LOC7463321 LOC7495732 LOC11412063 LOC25483138 LOC11429978 LOC107899485 LOC107948601 LOC121225246 LOC106382650 LOC106419516 LOC106403778 LOC102624116 LOC102627698 LOC101254223 LOC101256801 LOC102585180 LOC102582766 LOC107817603 LOC107794025 LOC107802787 LOC4348796 LOC4324695 LOC100192089 LOC100192978 LOC100280509 LOC123062052 LOC123070776 LOC123044691 LOC123444288 LOC123430073 LOC8070528 LOC8085486 LOC110433580 LOC100826237 LOC100822563 LOC100830866
Function* RING finger and CHY zinc finger domain-containing protein 1-like E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 CHY-type/CTCHY-type/RING-type Zinc finger protein CHY-type/CTCHY-type/RING-type Zinc finger protein E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 RING finger and CHY zinc finger domain-containing protein E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 putative E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 CHY-type/CTCHY-type/RING-type Zinc finger protein CHY-type/CTCHY-type/RING-type Zinc finger protein RING finger and CHY zinc finger domain-containing protein 1 probable E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34-like E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1-like probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
gma00052 Galactose metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00053 Ascorbate and aldarate metabolism 2
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
mtr04120 Ubiquitin mediated proteolysis 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi00052 Galactose metabolism 2
ghi00430 Taurine and hypotaurine metabolism 2
ghi00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 8
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna01200 Carbon metabolism 4
bna00071 Fatty acid degradation 4
bna00280 Valine, leucine and isoleucine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 4
cit00561 Glycerolipid metabolism 3
cit00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 3
sot00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04820 Cytoskeleton in muscle cells 2
nta04120 Ubiquitin mediated proteolysis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 5
nta00330 Arginine and proline metabolism 3
nta00260 Glycine, serine and threonine metabolism 3
nta00500 Starch and sucrose metabolism 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 6
tae00650 Butanoate metabolism 3
tae04146 Peroxisome 3
tae04120 Ubiquitin mediated proteolysis 3
tae00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 3
tae00650 Butanoate metabolism 3
tae04146 Peroxisome 3
tae04120 Ubiquitin mediated proteolysis 3
tae00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00052 Galactose metabolism 3
tae00561 Glycerolipid metabolism 3
tae00600 Sphingolipid metabolism 3
tae00603 Glycosphingolipid biosynthesis - globo and isoglobo series 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 3
sbi00260 Glycine, serine and threonine metabolism 3
sbi00630 Glyoxylate and dicarboxylate metabolism 3
sbi00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 4
bdi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 4
bdi04626 Plant-pathogen interaction 4
bdi04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100252623 100258546 100241783 832356 832631 100812709 100783915 100802067 103856536 103854743 7463321 7495732 11412063 25483138 11429978 107899485 107948601 121225246 106382650 106419516 106403778 102624116 102627698 101254223 101256801 102585180 102582766 107817603 107794025 107802787 4348796 4324695 100192089 100192978 100280509 123062052 123070776 123044691 123444288 123430073 8070528 8085486 110433580 100826237 100822563 100830866
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