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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100280509   RING finger and CHY zinc finger domain-containing protein 1 
 zma-r.6   100280509   RING finger and CHY zinc finger domain-containing protein 1 
 zma-m.5   100280509   RING finger and CHY zinc finger domain-containing protein 1 
 zma-u.5   100192089   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 zma-u.5   100192978   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 osa-u.5   4348796   E3 ubiquitin-protein ligase RZFP34 
 osa-u.5   4324695   probable E3 ubiquitin-protein ligase RZFP34 
 ath-u.5   AT5G22920   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 ath-u.5   AT5G25560   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 gma-u.5   100803569   probable E3 ubiquitin-protein ligase RZFP34 
 gma-u.5   100812023   C2H2-Zn transcription factor 
 gma-u.5   100812709   E3 ubiquitin-protein ligase RZFP34 
 sly-u.5   101254223   probable E3 ubiquitin-protein ligase RZFP34 
 sly-u.5   101256801   RING finger and CHY zinc finger domain-containing protein 
 vvi-u.5   100241783   E3 ubiquitin-protein ligase RZFP34 
 vvi-u.5   100252623   RING finger and CHY zinc finger domain-containing protein 1-like 
 vvi-u.5   100258546   E3 ubiquitin-protein ligase RZFP34 
 ppo-u.5   7463321   E3 ubiquitin-protein ligase RZFP34 
 ppo-u.5   7495732   probable E3 ubiquitin-protein ligase RZFP34 
 mtr-u.5   11412063   E3 ubiquitin-protein ligase RZFP34 
 mtr-u.5   11429978   probable E3 ubiquitin-protein ligase RZFP34 
 mtr-u.5   25481902   probable E3 ubiquitin-protein ligase RZFP34 

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Top 50 coexpressed genes to 100280509 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100280509 (zma-u.5 coexpression data)

CoexMap"100280509"


zmaLOC100280509 | Entrez gene ID : 100280509      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 2 2 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma04120 [list] [network] Ubiquitin mediated proteolysis (176 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (319 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (391 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (251 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (807 genes)  IEA  
Protein NP_001146901.1 [sequence] [blastp]
XP_008672787.1 [sequence] [blastp]
XP_008672788.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for NP_001146901.1)
nucl 5,  cyto 4  (predict for XP_008672787.1)
nucl 5,  cyto 4  (predict for XP_008672788.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001146901.1)
other 7  (predict for XP_008672787.1)
other 7  (predict for XP_008672788.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100280509
zma-r.6
for
100280509
zma-m.5
for
100280509
zma-u.5
for
100192089
zma-u.5
for
100192978
osa-u.5
for
4348796
osa-u.5
for
4324695
ath-u.5
for
AT5G22920
ath-u.5
for
AT5G25560
gma-u.5
for
100803569
gma-u.5
for
100812023
gma-u.5
for
100812709
sly-u.5
for
101254223
sly-u.5
for
101256801
vvi-u.5
for
100241783
vvi-u.5
for
100252623
vvi-u.5
for
100258546
ppo-u.5
for
7463321
ppo-u.5
for
7495732
mtr-u.5
for
11412063
mtr-u.5
for
11429978
mtr-u.5
for
25481902


Ortholog ID: 2581
Species zma zma sbi sbi osa osa tae tae hvu hvu bdi bdi ath ath gma gma sly sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit cit nta nta
Symbol LOC100192089 LOC100280509 LOC110433580 LOC8070528 LOC4324695 LOC4348796 LOC123062052 LOC123070776 LOC123444288 LOC123430073 LOC100822563 LOC100826237 AT5G22920 AT5G25560 LOC100802067 LOC100783915 LOC101254223 LOC101256801 LOC103854743 LOC103856536 LOC100241783 LOC100252623 LOC7495732 LOC7463321 LOC11429978 LOC11412063 LOC121225246 LOC107948601 LOC106382650 LOC106419516 LOC102585180 LOC102582766 LOC102627698 LOC102624116 LOC107794025 LOC107817603
Function* CHY-type/CTCHY-type/RING-type Zinc finger protein RING finger and CHY zinc finger domain-containing protein 1 E3 ubiquitin-protein ligase MIEL1-like E3 ubiquitin-protein ligase MIEL1 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34-like E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 CHY-type/CTCHY-type/RING-type Zinc finger protein CHY-type/CTCHY-type/RING-type Zinc finger protein E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 RING finger and CHY zinc finger domain-containing protein probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 RING finger and CHY zinc finger domain-containing protein 1-like probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 6
tae00650 Butanoate metabolism 3
tae04146 Peroxisome 3
tae04120 Ubiquitin mediated proteolysis 3
tae00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 3
tae00650 Butanoate metabolism 3
tae04146 Peroxisome 3
tae04120 Ubiquitin mediated proteolysis 3
tae00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 4
bdi04626 Plant-pathogen interaction 4
bdi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 4
bdi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
gma00052 Galactose metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00053 Ascorbate and aldarate metabolism 2
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi00052 Galactose metabolism 2
ghi00430 Taurine and hypotaurine metabolism 2
ghi00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 8
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna01200 Carbon metabolism 4
bna00071 Fatty acid degradation 4
bna00280 Valine, leucine and isoleucine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 3
sot00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 4
cit00561 Glycerolipid metabolism 3
cit00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04820 Cytoskeleton in muscle cells 2
nta04120 Ubiquitin mediated proteolysis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100192089 100280509 110433580 8070528 4324695 4348796 123062052 123070776 123444288 123430073 100822563 100826237 832356 832631 100802067 100783915 101254223 101256801 103854743 103856536 100241783 100252623 7495732 7463321 11429978 11412063 121225246 107948601 106382650 106419516 102585180 102582766 102627698 102624116 107794025 107817603
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