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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100253849   uncharacterized LOC100253849 
 vvi-r.5   100253849   uncharacterized LOC100253849 
 vvi-u.5   100255482   uncharacterized LOC100255482 
 ath-u.5   AT4G31200   SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein 
 gma-u.5   100816468   calcium homeostasis endoplasmic reticulum protein 
 gma-u.5   100802329   calcium homeostasis endoplasmic reticulum protein 
 bra-r.6   103852032   calcium homeostasis endoplasmic reticulum protein 
 ppo-u.5   18100800   uncharacterized LOC18100800 
 ppo-u.5   18107571   uncharacterized LOC18107571 
 mtr-u.5   11415192   calcium homeostasis endoplasmic reticulum protein 
 ghi-r.1   107962152   uncharacterized LOC107962152 
 bna-r.1   106354715   calcium homeostasis endoplasmic reticulum protein-like 
 bna-r.1   106383852   calcium homeostasis endoplasmic reticulum protein-like 
 cit-r.1   102606916   uncharacterized LOC102606916 
 sly-u.5   101253640   uncharacterized LOC101253640 
 sot-r.1   PPS2   calcium homeostasis endoplasmic reticulum protein-like 
 nta-r.1   107808252   SUPPRESSOR-OF-WHITE-APRICOT/SURP RNA-binding domain containing protein 1 
 nta-r.1   107792995   SUPPRESSOR-OF-WHITE-APRICOT/SURP RNA-binding domain containing protein 1 
 nta-r.1   107792887   SUPPRESSOR-OF-WHITE-APRICOT/SURP RNA-binding domain containing protein 1-like 
 osa-u.5   9266375   uncharacterized LOC9266375 
 zma-u.5   100216800   uncharacterized LOC100216800 
 tae-r.2   123148963   calcium homeostasis endoplasmic reticulum protein 
 tae-r.2   123165691   calcium homeostasis endoplasmic reticulum protein 
 hvu-r.1   123410105   calcium homeostasis endoplasmic reticulum protein 
 sbi-r.1   8083299   calcium homeostasis endoplasmic reticulum protein 
 bdi-r.1   100846183   calcium homeostasis endoplasmic reticulum protein 
 cre-r.1   CHLRE_04g222300v5   uncharacterized protein 

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Top 50 coexpressed genes to 100253849 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100253849 (vvi-u.5 coexpression data)

CoexMap"100253849"


vviLOC100253849 | Entrez gene ID : 100253849      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 2 1 1 2 1 1 1 3 1 1 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006874 [list] [network] intracellular calcium ion homeostasis  (33 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (548 genes)  IEA  
GO CC
GO:0048471 [list] [network] perinuclear region of cytoplasm  (10 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_010657574.1 [sequence] [blastp]
XP_010657575.1 [sequence] [blastp]
XP_010657576.1 [sequence] [blastp]
XP_019079333.1 [sequence] [blastp]
XP_059597161.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_010657574.1)
nucl 9  (predict for XP_010657575.1)
nucl 10  (predict for XP_010657576.1)
nucl 9  (predict for XP_019079333.1)
nucl 10  (predict for XP_059597161.1)
Subcellular
localization
TargetP
other 5  (predict for XP_010657574.1)
other 5  (predict for XP_010657575.1)
other 5  (predict for XP_010657576.1)
other 5  (predict for XP_019079333.1)
other 5  (predict for XP_059597161.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100253849
vvi-r.5
for
100253849
vvi-u.5
for
100255482
ath-u.5
for
AT4G31200
gma-u.5
for
100816468
gma-u.5
for
100802329
bra-r.6
for
103852032
ppo-u.5
for
18100800
ppo-u.5
for
18107571
mtr-u.5
for
11415192
ghi-r.1
for
107962152
bna-r.1
for
106354715
bna-r.1
for
106383852
cit-r.1
for
102606916
sly-u.5
for
101253640
sot-r.1
for
PPS2
nta-r.1
for
107808252
nta-r.1
for
107792995
nta-r.1
for
107792887
osa-u.5
for
9266375
zma-u.5
for
100216800
tae-r.2
for
123148963
tae-r.2
for
123165691
hvu-r.1
for
123410105
sbi-r.1
for
8083299
bdi-r.1
for
100846183
cre-r.1
for
CHLRE_04g222300v5


Ortholog ID: 9055
Species vvi vvi ath gma gma bra ppo ppo mtr ghi bna bna cit sly sot nta nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100253849 LOC100255482 AT4G31200 LOC100816468 LOC100802329 LOC103852032 LOC18100800 LOC18107571 LOC11415192 LOC107962152 LOC106354715 LOC106383852 LOC102606916 LOC101253640 PPS2 LOC107792995 LOC107792887 LOC107803793 LOC9266375 LOC100216800 LOC123148963 LOC123165691 LOC123410105 LOC8083299 LOC100846183 CHLRE_04g222300v5
Function* uncharacterized LOC100253849 uncharacterized LOC100255482 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein uncharacterized LOC18100800 uncharacterized LOC18107571 calcium homeostasis endoplasmic reticulum protein uncharacterized LOC107962152 calcium homeostasis endoplasmic reticulum protein-like calcium homeostasis endoplasmic reticulum protein-like uncharacterized LOC102606916 uncharacterized LOC101253640 calcium homeostasis endoplasmic reticulum protein-like SUPPRESSOR-OF-WHITE-APRICOT/SURP RNA-binding domain containing protein 1 SUPPRESSOR-OF-WHITE-APRICOT/SURP RNA-binding domain containing protein 1-like SUPPRESSOR-OF-WHITE-APRICOT/SURP RNA-binding domain containing protein 1-like uncharacterized LOC9266375 uncharacterized LOC100216800 calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03018 RNA degradation 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 4
cit03040 Spliceosome 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00510 N-Glycan biosynthesis 3
sot00513 Various types of N-glycan biosynthesis 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03040 Spliceosome 2
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100253849 100255482 829247 100816468 100802329 103852032 18100800 18107571 11415192 107962152 106354715 106383852 102606916 101253640 102578923 107792995 107792887 107803793 9266375 100216800 123148963 123165691 123410105 8083299 100846183 5717868
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