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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100254270   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 vvi-r.5   100254270   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 ath-u.5   MEF8   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   MEF8S   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100799560   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 gma-u.5   100781261   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 bra-r.6   103850933   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 bra-r.6   103842177   pentatricopeptide repeat-containing protein At2g25580 
 ppo-u.5   7455408   pentatricopeptide repeat-containing protein At2g34370, mitochondrial 
 mtr-u.5   25482910   pentatricopeptide repeat-containing protein At2g25580 
 mtr-u.5   11414006   pentatricopeptide repeat-containing protein At2g25580 
 mtr-u.5   11439350   pentatricopeptide repeat-containing protein At2g25580-like 
 ghi-r.1   107927627   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 ghi-r.1   107945289   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 ghi-r.1   107945164   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 bna-r.1   106368324   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 bna-r.1   106413678   pentatricopeptide repeat-containing protein At2g25580-like 
 bna-r.1   106375360   pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like 
 cit-r.1   102610187   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 sly-u.5   101243708   pentatricopeptide repeat-containing protein 
 sot-r.1   102581114   pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like 
 nta-r.1   107804092   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 nta-r.1   107775836   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 osa-u.5   4327881   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 zma-u.5   103651234   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 tae-r.2   123079087   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 tae-r.2   123061974   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 tae-r.2   123070674   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 hvu-r.1   123444352   pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like 
 sbi-r.1   8075546   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 
 bdi-r.1   100842540   pentatricopeptide repeat-containing protein At4g32450, mitochondrial 

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Top 50 coexpressed genes to 100254270 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100254270 (vvi-u.5 coexpression data)

CoexMap"100254270"


vviLOC100254270 | Entrez gene ID : 100254270      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 2 2 1 3 3 3 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002282464.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  vacu 1  (predict for XP_002282464.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002282464.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100254270
vvi-r.5
for
100254270
ath-u.5
for
MEF8
ath-u.5
for
MEF8S
gma-u.5
for
100799560
gma-u.5
for
100781261
bra-r.6
for
103850933
bra-r.6
for
103842177
ppo-u.5
for
7455408
mtr-u.5
for
25482910
mtr-u.5
for
11414006
mtr-u.5
for
11439350
ghi-r.1
for
107927627
ghi-r.1
for
107945289
ghi-r.1
for
107945164
bna-r.1
for
106368324
bna-r.1
for
106413678
bna-r.1
for
106375360
cit-r.1
for
102610187
sly-u.5
for
101243708
sot-r.1
for
102581114
nta-r.1
for
107804092
nta-r.1
for
107775836
osa-u.5
for
4327881
zma-u.5
for
103651234
tae-r.2
for
123079087
tae-r.2
for
123061974
tae-r.2
for
123070674
hvu-r.1
for
123444352
sbi-r.1
for
8075546
bdi-r.1
for
100842540


Ortholog ID: 5952
Species vvi ath ath gma gma bra bra ppo mtr mtr mtr ghi ghi ghi bna bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100254270 MEF8S AT1G29710 LOC100799560 LOC100781261 LOC103850933 LOC103842177 LOC7455408 LOC25482910 LOC11414006 LOC11439350 LOC107927627 LOC107945289 LOC107898759 LOC106368324 LOC106413678 LOC106368556 LOC102610187 LOC101243708 LOC102581114 LOC107804092 LOC107775836 LOC4327881 LOC103651234 LOC123079087 LOC123061974 LOC123070674 LOC123444352 LOC8075546 LOC100842540
Function* pentatricopeptide repeat-containing protein At4g32450, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At2g25580 pentatricopeptide repeat-containing protein At2g34370, mitochondrial pentatricopeptide repeat-containing protein At2g25580 pentatricopeptide repeat-containing protein At2g25580 pentatricopeptide repeat-containing protein At2g25580-like pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At2g25580-like pentatricopeptide repeat-containing protein At2g25580 pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like pentatricopeptide repeat-containing protein At4g32450, mitochondrial pentatricopeptide repeat-containing protein At4g32450, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 11
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 11
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100254270 829380 839848 100799560 100781261 103850933 103842177 7455408 25482910 11414006 11439350 107927627 107945289 107898759 106368324 106413678 106368556 102610187 101243708 102581114 107804092 107775836 4327881 103651234 123079087 123061974 123070674 123444352 8075546 100842540
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