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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100254721   pentatricopeptide repeat-containing protein CRR2, chloroplastic 
 vvi-r.5   100254721   pentatricopeptide repeat-containing protein CRR2, chloroplastic 
 mtr-u.5   11412244   pentatricopeptide repeat-containing protein At4g16470 
 mtr-u.5   11417525   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 mtr-u.5   11421991   pentatricopeptide repeat-containing protein At4g16470 
 ghi-r.1   107889205   putative pentatricopeptide repeat-containing protein At1g68930 
 ghi-r.1   107891579   putative pentatricopeptide repeat-containing protein At1g68930 

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Top 50 coexpressed genes to 100254721 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100254721 (vvi-u.5 coexpression data)

CoexMap"100254721"


vviLOC100254721 | Entrez gene ID : 100254721      
Species vvi mtr ghi bdi bna ppo sbi gma cit hvu sot sly nta osa tae zma cre ath bra
Paralog 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002274172.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  extr 2  (predict for XP_002274172.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002274172.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100254721
vvi-r.5
for
100254721
mtr-u.5
for
11412244
mtr-u.5
for
11417525
mtr-u.5
for
11421991
ghi-r.1
for
107889205
ghi-r.1
for
107891579


Ortholog ID: 18802
Species vvi mtr mtr mtr ghi ghi
Symbol LOC100254721 LOC11412244 LOC11417525 LOC11421991 LOC107889205 LOC107891579
Function* pentatricopeptide repeat-containing protein CRR2, chloroplastic pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At1g06140, mitochondrial pentatricopeptide repeat-containing protein At4g16470 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100254721 11412244 11417525 11421991 107889205 107891579
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