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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107891579   putative pentatricopeptide repeat-containing protein At1g68930 
 vvi-u.5   100254721   pentatricopeptide repeat-containing protein CRR2, chloroplastic 
 mtr-u.5   11412244   pentatricopeptide repeat-containing protein At4g16470 
 mtr-u.5   11417525   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 mtr-u.5   11421991   pentatricopeptide repeat-containing protein At4g16470 

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Top 50 coexpressed genes to 107891579 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107891579 (ghi-r.1 coexpression data)

CoexMap"107891579"


ghiLOC107891579 | Entrez gene ID : 107891579    
Species ghi vvi mtr hvu zma sly ath gma bna sbi cit bra osa ppo bdi nta tae cre sot
Paralog 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016671912.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_016671912.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016671912.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107891579
vvi-u.5
for
100254721
mtr-u.5
for
11412244
mtr-u.5
for
11417525
mtr-u.5
for
11421991


Ortholog ID: 18802
Species ghi ghi vvi mtr mtr
Symbol LOC107889205 LOC107891579 LOC100254721 LOC11412244 LOC11421991
Function* putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 pentatricopeptide repeat-containing protein CRR2, chloroplastic pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107889205 107891579 100254721 11412244 11421991
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