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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100254897   inactive beta-amylase 4, chloroplastic 
 vvi-r.5   100254897   inactive beta-amylase 4, chloroplastic 
 vvi-m.5   100254897   inactive beta-amylase 4, chloroplastic 
 ath-u.5   BAM4   beta-amylase 4 
 bra-r.6   103851866   inactive beta-amylase 4, chloroplastic 
 bra-r.6   103856969   inactive beta-amylase 4, chloroplastic 
 ghi-r.1   107920614   inactive beta-amylase 4, chloroplastic 
 ghi-r.1   107926329   inactive beta-amylase 4, chloroplastic 
 bna-r.1   106380881   inactive beta-amylase 4, chloroplastic 
 bna-r.1   106387399   inactive beta-amylase 4, chloroplastic 
 bna-r.1   106389748   inactive beta-amylase 4, chloroplastic 

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Top 50 coexpressed genes to 100254897 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100254897 (vvi-u.5 coexpression data)

CoexMap""


vviLOC100254897 | Entrez gene ID : 100254897      
Species vvi ath bra ghi bna nta cre hvu gma ppo zma sot bdi sbi osa mtr sly cit tae
Paralog 3 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function inactive beta-amylase 4, chloroplastic
KEGG
GO BP
GO:0000272 [list] [network] polysaccharide catabolic process  (46 genes)  IEA  
GO CC
GO MF
GO:0016161 [list] [network] beta-amylase activity  (10 genes)  IEA  
Protein XP_002265698.1 [sequence] [blastp]
XP_059591147.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  chlo 1,  cysk 1,  nucl_plas 1  (predict for XP_002265698.1)
cyto 7,  nucl 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for XP_059591147.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002265698.1)
other 8  (predict for XP_059591147.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100254897
vvi-r.5
for
100254897
vvi-m.5
for
100254897
ath-u.5
for
BAM4
bra-r.6
for
103851866
bra-r.6
for
103856969
ghi-r.1
for
107920614
ghi-r.1
for
107926329
bna-r.1
for
106380881
bna-r.1
for
106387399
bna-r.1
for
106389748

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Ortholog ID: 15229
Species vvi ath bra bra ghi ghi bna bna bna
Symbol LOC100254897 BAM4 LOC103851866 LOC103856969 LOC107920614 LOC107926329 LOC106380881 LOC106387399 LOC125575096
Function* inactive beta-amylase 4, chloroplastic beta-amylase 4 inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 3
bra00592 alpha-Linolenic acid metabolism 3
bra00100 Steroid biosynthesis 2
bra00561 Glycerolipid metabolism 2
bra00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100254897 835664 103851866 103856969 107920614 107926329 106380881 106387399 125575096
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