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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106387399   inactive beta-amylase 4, chloroplastic 
 bna-r.1   106380881   inactive beta-amylase 4, chloroplastic 
 bna-r.1   106389748   inactive beta-amylase 4, chloroplastic 
 bna-r.1   125575096   inactive beta-amylase 4, chloroplastic-like 
 bra-r.6   103851866   inactive beta-amylase 4, chloroplastic 
 bra-r.6   103856969   inactive beta-amylase 4, chloroplastic 
 ath-u.5   BAM4   beta-amylase 4 
 ghi-r.1   107920614   inactive beta-amylase 4, chloroplastic 
 ghi-r.1   107926329   inactive beta-amylase 4, chloroplastic 
 vvi-u.5   100254897   inactive beta-amylase 4, chloroplastic 

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Top 50 coexpressed genes to 106387399 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106387399 (bna-r.1 coexpression data)

CoexMap"106387399"


bnaLOC106387399 | Entrez gene ID : 106387399    
Species bna bra ath ghi vvi cre ppo hvu mtr nta tae bdi osa gma zma sly cit sot sbi
Paralog 4 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000272 [list] [network] polysaccharide catabolic process  (109 genes)  IEA  
GO CC
GO MF
GO:0016161 [list] [network] beta-amylase activity  (32 genes)  IEA  
Protein XP_013682703.2 [sequence] [blastp]
XP_048629251.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 3,  chlo 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_013682703.2)
nucl 4,  mito 3,  chlo 2,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for XP_048629251.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013682703.2)
other 7  (predict for XP_048629251.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106387399
bna-r.1
for
106380881
bna-r.1
for
106389748
bna-r.1
for
125575096
bra-r.6
for
103851866
bra-r.6
for
103856969
ath-u.5
for
BAM4
ghi-r.1
for
107920614
ghi-r.1
for
107926329
vvi-u.5
for
100254897


Ortholog ID: 15229
Species bna bna bna bra bra ath ghi ghi vvi
Symbol LOC106387399 LOC106380881 LOC125575096 LOC103851866 LOC103856969 BAM4 LOC107920614 LOC107926329 LOC100254897
Function* inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic-like inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic beta-amylase 4 inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic inactive beta-amylase 4, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 3
bra00592 alpha-Linolenic acid metabolism 3
bra00100 Steroid biosynthesis 2
bra00561 Glycerolipid metabolism 2
bra00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106387399 106380881 125575096 103851866 103856969 835664 107920614 107926329 100254897
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