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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100255109   anaphase-promoting complex subunit 4 
 vvi-r.5   100255109   anaphase-promoting complex subunit 4 
 vvi-m.5   100255109   anaphase-promoting complex subunit 4 
 ath-u.5   APC4   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100527617   anaphase-promoting complex subunit 4 
 bra-r.6   103859125   anaphase-promoting complex subunit 4 
 ppo-u.5   7490789   anaphase-promoting complex subunit 4 
 mtr-u.5   11421313   anaphase-promoting complex subunit 4 
 ghi-r.1   121222289   anaphase-promoting complex subunit 4 
 ghi-r.1   107925255   anaphase-promoting complex subunit 4 
 bna-r.1   125578104   anaphase-promoting complex subunit 4 
 bna-r.1   106375728   anaphase-promoting complex subunit 4 
 cit-r.1   102627214   anaphase-promoting complex subunit 4 
 sly-u.5   101255653   anaphase-promoting complex subunit 4 
 sot-r.1   102591780   anaphase-promoting complex subunit 4 
 nta-r.1   107831050   anaphase-promoting complex subunit 4 
 nta-r.1   107771175   anaphase-promoting complex subunit 4 
 osa-u.5   4330947   anaphase-promoting complex subunit 4 
 zma-u.5   103637954   Anaphase-promoting complex subunit 4 
 zma-u.5   100304372   uncharacterized LOC100304372 
 tae-r.2   123145810   anaphase-promoting complex subunit 4 
 tae-r.2   123138744   anaphase-promoting complex subunit 4 
 tae-r.2   123128677   anaphase-promoting complex subunit 4 
 hvu-r.1   123404004   anaphase-promoting complex subunit 4 
 hvu-r.1   123448353   anaphase-promoting complex subunit 4-like 
 sbi-r.1   8082701   anaphase-promoting complex subunit 4 
 bdi-r.1   100825517   anaphase-promoting complex subunit 4 
 cre-r.1   CHLRE_12g556650v5   uncharacterized protein 

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Top 50 coexpressed genes to 100255109 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100255109 (vvi-u.5 coexpression data)

CoexMap"100255109"


vviLOC100255109 | Entrez gene ID : 100255109      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 2 2 1 1 1 2 1 2 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi04120 [list] [network] Ubiquitin mediated proteolysis (130 genes)
GO BP
GO:0045842 [list] [network] positive regulation of mitotic metaphase/anaphase transition  (4 genes)  IEA  
GO:0070979 [list] [network] protein K11-linked ubiquitination  (5 genes)  IEA  
GO:0031145 [list] [network] anaphase-promoting complex-dependent catabolic process  (16 genes)  IEA  
GO CC
GO:0034399 [list] [network] nuclear periphery  (2 genes)  IEA  
GO:0005680 [list] [network] anaphase-promoting complex  (20 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010646155.1 [sequence] [blastp]
XP_019073578.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  vacu 1  (predict for XP_010646155.1)
nucl 6,  cyto 2,  chlo 1,  vacu 1  (predict for XP_019073578.1)
Subcellular
localization
TargetP
other 9  (predict for XP_010646155.1)
other 9  (predict for XP_019073578.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100255109
vvi-r.5
for
100255109
vvi-m.5
for
100255109
ath-u.5
for
APC4
gma-u.5
for
100527617
bra-r.6
for
103859125
ppo-u.5
for
7490789
mtr-u.5
for
11421313
ghi-r.1
for
121222289
ghi-r.1
for
107925255
bna-r.1
for
125578104
bna-r.1
for
106375728
cit-r.1
for
102627214
sly-u.5
for
101255653
sot-r.1
for
102591780
nta-r.1
for
107831050
nta-r.1
for
107771175
osa-u.5
for
4330947
zma-u.5
for
103637954
zma-u.5
for
100304372
tae-r.2
for
123145810
tae-r.2
for
123138744
tae-r.2
for
123128677
hvu-r.1
for
123404004
hvu-r.1
for
123448353
sbi-r.1
for
8082701
bdi-r.1
for
100825517
cre-r.1
for
CHLRE_12g556650v5


Ortholog ID: 9040
Species vvi ath gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC100255109 APC4 LOC100527617 LOC103859125 LOC7490789 LOC11421313 LOC121222289 LOC107925255 LOC125578104 LOC106375728 LOC102627214 LOC101255653 LOC102591780 LOC107831050 LOC107771175 LOC4330947 LOC103637954 LOC100304372 LOC123145810 LOC123138744 LOC123128677 LOC123404004 LOC123448353 LOC8082701 LOC100825517 CHLRE_12g556650v5
Function* anaphase-promoting complex subunit 4 Transducin/WD40 repeat-like superfamily protein anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 Anaphase-promoting complex subunit 4 uncharacterized LOC100304372 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4-like anaphase-promoting complex subunit 4 anaphase-promoting complex subunit 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03030 DNA replication 3
ath03410 Base excision repair 3
ath03440 Homologous recombination 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 4
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 10
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03250 Viral life cycle - HIV-1 6
ghi04120 Ubiquitin mediated proteolysis 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 7
ghi04120 Ubiquitin mediated proteolysis 6
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03250 Viral life cycle - HIV-1 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 3
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna04814 Motor proteins 2
bna03460 Fanconi anemia pathway 2
bna03030 DNA replication 2
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 5
sly03020 RNA polymerase 2
sly03008 Ribosome biogenesis in eukaryotes 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
nta04120 Ubiquitin mediated proteolysis 3
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 3
nta04120 Ubiquitin mediated proteolysis 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa03410 Base excision repair 3
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 3
osa03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae04120 Ubiquitin mediated proteolysis 3
tae03010 Ribosome 2
tae03440 Homologous recombination 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 10
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 2
hvu00230 Purine metabolism 2
hvu00250 Alanine, aspartate and glutamate metabolism 2
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03410 Base excision repair 2
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100255109 828238 100527617 103859125 7490789 11421313 121222289 107925255 125578104 106375728 102627214 101255653 102591780 107831050 107771175 4330947 103637954 100304372 123145810 123138744 123128677 123404004 123448353 8082701 100825517 5719758
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