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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100255412   replication protein A 70 kDa DNA-binding subunit B 
 vvi-r.5   100255412   replication protein A 70 kDa DNA-binding subunit B 
 vvi-m.5   100255412   replication protein A 70 kDa DNA-binding subunit B 
 ath-u.5   RPA70B   RPA70-kDa subunit B 
 ath-u.5   RPA70D   Replication factor-A protein 1-like protein 
 gma-u.5   100808364   replication protein A 70 kDa DNA-binding subunit B 
 gma-u.5   100777091   replication protein A 70 kDa DNA-binding subunit B 
 bra-r.6   103855752   replication protein A 70 kDa DNA-binding subunit B 
 bra-r.6   103860562   replication protein A 70 kDa DNA-binding subunit D 
 bra-r.6   103837365   replication protein A 70 kDa DNA-binding subunit D 
 ppo-u.5   18105740   replication protein A 70 kDa DNA-binding subunit B 
 mtr-u.5   25493890   replication protein A 70 kDa DNA-binding subunit B 
 ghi-r.1   107949785   replication protein A 70 kDa DNA-binding subunit B 
 ghi-r.1   107887093   replication protein A 70 kDa DNA-binding subunit B 
 bna-r.1   106384991   replication protein A 70 kDa DNA-binding subunit B 
 bna-r.1   106365940   replication protein A 70 kDa DNA-binding subunit B-like 
 bna-r.1   106366066   replication protein A 70 kDa DNA-binding subunit D-like 
 cit-r.1   102626798   replication protein A 70 kDa DNA-binding subunit B 
 sly-u.5   101255870   replication protein A 70 kDa DNA-binding subunit B 
 sot-r.1   102589752   replication protein A 70 kDa DNA-binding subunit B 
 nta-r.1   107823681   replication protein A 70 kDa DNA-binding subunit B-like 
 nta-r.1   107790306   replication protein A 70 kDa DNA-binding subunit B-like 
 osa-u.5   4332052   replication protein A 70 kDa DNA-binding subunit B-like 
 zma-u.5   100273584   Replication protein A DNA-binding subunit 
 zma-u.5   100280726   uncharacterized LOC100280726 
 tae-r.2   123098249   replication protein A 70 kDa DNA-binding subunit B 
 tae-r.2   123092976   replication protein A 70 kDa DNA-binding subunit B 
 tae-r.2   123085080   replication protein A 70 kDa DNA-binding subunit B 
 hvu-r.1   123449318   replication protein A 70 kDa DNA-binding subunit B-like 
 sbi-r.1   8056889   replication protein A 70 kDa DNA-binding subunit B 
 sbi-r.1   8081088   replication protein A 70 kDa DNA-binding subunit B 
 bdi-r.1   100845662   replication protein A 70 kDa DNA-binding subunit B 
 cre-r.1   CHLRE_16g651000v5   uncharacterized protein 

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Top 50 coexpressed genes to 100255412 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100255412 (vvi-u.5 coexpression data)

CoexMap"100255412"


vviLOC100255412 | Entrez gene ID : 100255412      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 2 3 1 1 2 3 1 1 1 2 1 2 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03030 [list] [network] DNA replication (42 genes)
vvi03420 [list] [network] Nucleotide excision repair (68 genes)
vvi03430 [list] [network] Mismatch repair (33 genes)
vvi03440 [list] [network] Homologous recombination (47 genes)
vvi03460 [list] [network] Fanconi anemia pathway (40 genes)
GO BP
GO:0007004 [list] [network] telomere maintenance via telomerase  (6 genes)  IEA  
GO:0006289 [list] [network] nucleotide-excision repair  (31 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (64 genes)  IEA  
GO:0051321 [list] [network] meiotic cell cycle  (74 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (115 genes)  IEA  
GO CC
GO:0005662 [list] [network] DNA replication factor A complex  (6 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0043047 [list] [network] single-stranded telomeric DNA binding  (5 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (32 genes)  IEA  
Protein XP_002283959.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  extr 1,  E.R. 1,  pero 1,  mito_plas 1  (predict for XP_002283959.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_002283959.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100255412
vvi-r.5
for
100255412
vvi-m.5
for
100255412
ath-u.5
for
RPA70B
ath-u.5
for
RPA70D
gma-u.5
for
100808364
gma-u.5
for
100777091
bra-r.6
for
103855752
bra-r.6
for
103860562
bra-r.6
for
103837365
ppo-u.5
for
18105740
mtr-u.5
for
25493890
ghi-r.1
for
107949785
ghi-r.1
for
107887093
bna-r.1
for
106384991
bna-r.1
for
106365940
bna-r.1
for
106366066
cit-r.1
for
102626798
sly-u.5
for
101255870
sot-r.1
for
102589752
nta-r.1
for
107823681
nta-r.1
for
107790306
osa-u.5
for
4332052
zma-u.5
for
100273584
zma-u.5
for
100280726
tae-r.2
for
123098249
tae-r.2
for
123092976
tae-r.2
for
123085080
hvu-r.1
for
123449318
sbi-r.1
for
8056889
sbi-r.1
for
8081088
bdi-r.1
for
100845662
cre-r.1
for
CHLRE_16g651000v5


Ortholog ID: 6337
Species vvi ath ath gma gma bra bra bra ppo mtr ghi ghi bna bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC100255412 RPA70B RPA70D LOC100808364 LOC100777091 LOC103855752 LOC103860562 LOC103837365 LOC18105740 LOC25493890 LOC107949785 LOC107887093 LOC106384991 LOC106409231 LOC106439952 LOC102626798 LOC101255870 LOC102589752 LOC107823681 LOC107790306 LOC4332052 LOC100273584 LOC100280726 LOC123098249 LOC123092976 LOC123085080 LOC123449318 LOC8056889 LOC8081088 LOC100845662 CHLRE_16g651000v5
Function* replication protein A 70 kDa DNA-binding subunit B RPA70-kDa subunit B Replication factor-A protein 1-like protein replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit D replication protein A 70 kDa DNA-binding subunit D replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit D-like replication protein A 70 kDa DNA-binding subunit D replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B-like replication protein A 70 kDa DNA-binding subunit B-like replication protein A 70 kDa DNA-binding subunit B-like Replication protein A DNA-binding subunit uncharacterized LOC100280726 replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B-like replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B replication protein A 70 kDa DNA-binding subunit B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 5
ath03440 Homologous recombination 5
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
ath03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 9
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma00240 Pyrimidine metabolism 4
gma01232 Nucleotide metabolism 4
gma03440 Homologous recombination 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 10
bra03420 Nucleotide excision repair 4
bra03430 Mismatch repair 4
bra03440 Homologous recombination 4
bra03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 6
bra03420 Nucleotide excision repair 4
bra03410 Base excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 6
bra03420 Nucleotide excision repair 4
bra03430 Mismatch repair 4
bra03440 Homologous recombination 4
bra03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 11
ppo03420 Nucleotide excision repair 3
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 4
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 5
ghi01232 Nucleotide metabolism 5
ghi00230 Purine metabolism 4
ghi00480 Glutathione metabolism 4
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi00480 Glutathione metabolism 4
ghi01232 Nucleotide metabolism 4
ghi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 8
bna03460 Fanconi anemia pathway 8
bna03030 DNA replication 6
bna03420 Nucleotide excision repair 6
bna03430 Mismatch repair 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 8
bna03460 Fanconi anemia pathway 8
bna03030 DNA replication 7
bna03420 Nucleotide excision repair 6
bna03430 Mismatch repair 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 8
bna03460 Fanconi anemia pathway 8
bna03030 DNA replication 6
bna03420 Nucleotide excision repair 6
bna03430 Mismatch repair 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly03430 Mismatch repair 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
sot03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 5
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 4
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta00310 Lysine degradation 2
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 6
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 7
zma03420 Nucleotide excision repair 4
zma03430 Mismatch repair 4
zma03440 Homologous recombination 3
zma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 7
zma03420 Nucleotide excision repair 3
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03440 Homologous recombination 4
tae03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
tae03420 Nucleotide excision repair 5
tae03430 Mismatch repair 5
tae03440 Homologous recombination 5
tae03460 Fanconi anemia pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03440 Homologous recombination 4
tae03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 7
sbi03440 Homologous recombination 3
sbi03430 Mismatch repair 3
sbi03420 Nucleotide excision repair 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 9
sbi03420 Nucleotide excision repair 3
sbi03430 Mismatch repair 3
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 9
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100255412 830696 836221 100808364 100777091 103855752 103860562 103837365 18105740 25493890 107949785 107887093 106384991 106409231 106439952 102626798 101255870 102589752 107823681 107790306 4332052 100273584 100280726 123098249 123092976 123085080 123449318 8056889 8081088 100845662 5723800
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