ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100255423	protein PAL OF QUIRKY
vvi-r.5	100255423	protein PAL OF QUIRKY
vvi-m.5	100255423	protein PAL OF QUIRKY
vvi-u.5	100242640	protein PAL OF QUIRKY
ath-u.5	AT3G26510	Octicosapeptide/Phox/Bem1p family protein
ath-u.5	AT3G48240	Octicosapeptide/Phox/Bem1p family protein
ath-u.5	AT5G63130	Octicosapeptide/Phox/Bem1p family protein
gma-u.5	100797123	uncharacterized LOC100797123
gma-u.5	100810563	uncharacterized LOC100810563
bra-r.6	103837458	uncharacterized LOC103837458
bra-r.6	103831599	uncharacterized LOC103831599
bra-r.6	103873733	uncharacterized LOC103873733
ppo-u.5	7453801	uncharacterized LOC7453801
ppo-u.5	7473212	uncharacterized LOC7473212
ppo-u.5	7458054	uncharacterized LOC7458054
mtr-u.5	25493721	uncharacterized LOC25493721
mtr-u.5	11415570	uncharacterized LOC11415570
mtr-u.5	11414328	uncharacterized LOC11414328
ghi-r.1	107886545	uncharacterized LOC107886545
ghi-r.1	107946242	uncharacterized LOC107946242
ghi-r.1	107928669	uncharacterized LOC107928669
bna-r.1	BNAA02G28090D	uncharacterized BNAA02G28090D
bna-r.1	111201387	uncharacterized LOC111201387
cit-r.1	102620638	uncharacterized LOC102620638
cit-r.1	102614073	hypothetical protein
sly-u.5	101267605	RAF-like serine/threonine-protein kinase PRAF
sly-u.5	101267816	protein PAL OF QUIRKY-like
sly-u.5	101266924	RAF-like serine/threonine-protein kinase PRAF
sot-r.1	102585593	uncharacterized LOC102585593
sot-r.1	102581671	uncharacterized LOC102581671
sot-r.1	102580365	uncharacterized LOC102580365
nta-r.1	107820963	RAF-like serine/threonine-protein kinase 20
nta-r.1	107795156	uncharacterized LOC107795156
nta-r.1	142182041	RAF-like serine/threonine-protein kinase PRAF
osa-u.5	4338858	uncharacterized LOC4338858
osa-u.5	4350431	uncharacterized LOC4350431
osa-u.5	4350433	uncharacterized LOC4350433
zma-u.5	100281824	uncharacterized LOC100281824
zma-u.5	100284710	uncharacterized LOC100284710
tae-r.2	123134220	uncharacterized LOC123134220
tae-r.2	123056843	uncharacterized LOC123056843
tae-r.2	123130668	uncharacterized LOC123130668
hvu-r.1	123402373	uncharacterized LOC123402373
hvu-r.1	123443128	uncharacterized LOC123443128
sbi-r.1	8071849	uncharacterized LOC8071849
sbi-r.1	8077142	uncharacterized LOC8077142
bdi-r.1	100829124	uncharacterized LOC100829124

Top 50 coexpressed genes to 100255423 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100255423 (vvi-u.5 coexpression data)

CoexMap"100255423"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4232 genes)

IEA

Protein

XP_002280847.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, nucl 2, extr 2, mito 1, cysk_nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_002280847.1)

Subcellular
localization
TargetP

other 8

(predict for XP_002280847.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100255423	vvi-r.5 for 100255423	vvi-m.5 for 100255423	vvi-u.5 for 100242640	ath-u.5 for AT3G26510	ath-u.5 for AT3G48240	ath-u.5 for AT5G63130	gma-u.5 for 100797123	gma-u.5 for 100810563	bra-r.6 for 103837458	bra-r.6 for 103831599	bra-r.6 for 103873733	ppo-u.5 for 7453801	ppo-u.5 for 7473212	ppo-u.5 for 7458054	mtr-u.5 for 25493721	mtr-u.5 for 11415570	mtr-u.5 for 11414328	ghi-r.1 for 107886545	ghi-r.1 for 107946242	ghi-r.1 for 107928669	bna-r.1 for BNAA02G28090D	bna-r.1 for 111201387	cit-r.1 for 102620638	cit-r.1 for 102614073	sly-u.5 for 101267605	sly-u.5 for 101267816	sly-u.5 for 101266924	sot-r.1 for 102585593	sot-r.1 for 102581671	sot-r.1 for 102580365	nta-r.1 for 107820963	nta-r.1 for 107795156	nta-r.1 for 142182041	osa-u.5 for 4338858	osa-u.5 for 4350431	osa-u.5 for 4350433	zma-u.5 for 100281824	zma-u.5 for 100284710	tae-r.2 for 123134220	tae-r.2 for 123056843	tae-r.2 for 123130668	hvu-r.1 for 123402373	hvu-r.1 for 123443128	sbi-r.1 for 8071849	sbi-r.1 for 8077142	bdi-r.1 for 100829124

Ortholog

Ortholog ID: 1748

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

protein PAL OF QUIRKY

Octicosapeptide/Phox/Bem1p family protein

octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

uncharacterized LOC100810563

uncharacterized LOC100815157

uncharacterized LOC100815502

uncharacterized LOC103837458

uncharacterized LOC103831599

uncharacterized LOC103873161

uncharacterized LOC7453801

uncharacterized LOC7473212

uncharacterized LOC7458054

uncharacterized LOC25493721

uncharacterized LOC11415570

uncharacterized LOC11414328

uncharacterized LOC107946242

uncharacterized LOC107928669

uncharacterized LOC107909705

uncharacterized BNAA02G28090D

uncharacterized BNAA06G32850D

uncharacterized BNAC02G36170D

uncharacterized LOC102620638

hypothetical protein

RAF-like serine/threonine-protein kinase PRAF

protein PAL OF QUIRKY-like

RAF-like serine/threonine-protein kinase PRAF

uncharacterized LOC102585593

uncharacterized LOC102581671

uncharacterized LOC102580365

RAF-like serine/threonine-protein kinase 20

uncharacterized LOC107795156

RAF-like serine/threonine-protein kinase PRAF

uncharacterized LOC4338858

uncharacterized LOC4350431

uncharacterized LOC4350433

uncharacterized LOC100281824

uncharacterized LOC100284710

uncharacterized LOC123134220

uncharacterized LOC123134228

uncharacterized LOC123182102

uncharacterized LOC123402373

uncharacterized LOC123443128

uncharacterized LOC8071849

uncharacterized LOC8077142

uncharacterized LOC100829124

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2
ath00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00220	Arginine biosynthesis	2
gma00250	Alanine, aspartate and glutamate metabolism	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma00910	Nitrogen metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00908	Zeatin biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00250	Alanine, aspartate and glutamate metabolism	4
ghi00260	Glycine, serine and threonine metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi01200	Carbon metabolism	4
ghi01210	2-Oxocarboxylic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00250	Alanine, aspartate and glutamate metabolism	4
ghi00260	Glycine, serine and threonine metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi01200	Carbon metabolism	4
ghi01210	2-Oxocarboxylic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03272	Virion - Hepatitis viruses	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00740	Riboflavin metabolism	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00561	Glycerolipid metabolism	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	6
tae04120	Ubiquitin mediated proteolysis	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00908	Zeatin biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100255423

100242640

823982

836433

843401

100810563

100815157

100815502

103837458

103831599

103873161

7453801

7473212

7458054

25493721

11415570

11414328

107946242

107928669

107909705

106402326

106349333

106379819

102620638

102614073

101267605

101267816

101266924

102585593

102581671

102580365

107820963

107795156

142182041

4338858

4350431

4350433

100281824

100284710

123134220

123134228

123182102

123402373

123443128

8071849

8077142

100829124

The preparation time of this page was 0.2 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	3	3	3	2	2	3	3	3	3	2	3	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100255423 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100255423 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**