ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107928669	uncharacterized LOC107928669
ghi-r.1	107909705	uncharacterized LOC107909705
ghi-r.1	107886545	uncharacterized LOC107886545
ghi-r.1	107946242	uncharacterized LOC107946242
ath-u.5	AT3G26510	Octicosapeptide/Phox/Bem1p family protein
ath-u.5	AT3G48240	Octicosapeptide/Phox/Bem1p family protein
ath-u.5	AT5G63130	Octicosapeptide/Phox/Bem1p family protein
bra-r.6	103831599	uncharacterized LOC103831599
bra-r.6	103873733	uncharacterized LOC103873733
bra-r.6	103873161	uncharacterized LOC103873161
bna-r.1	BNACNNG09400D	uncharacterized BNACNNG09400D
bna-r.1	106366184	uncharacterized LOC106366184
cit-r.1	102620638	uncharacterized LOC102620638
cit-r.1	102614073	hypothetical protein
gma-u.5	100797123	uncharacterized LOC100797123
gma-u.5	100810563	uncharacterized LOC100810563
vvi-u.5	100255423	protein PAL OF QUIRKY
vvi-u.5	100242640	protein PAL OF QUIRKY
ppo-u.5	7453801	uncharacterized LOC7453801
ppo-u.5	7460752	uncharacterized LOC7460752
ppo-u.5	7473212	uncharacterized LOC7473212
mtr-u.5	25493721	uncharacterized LOC25493721
mtr-u.5	11414328	uncharacterized LOC11414328
mtr-u.5	11415570	uncharacterized LOC11415570
sly-u.5	101267605	RAF-like serine/threonine-protein kinase PRAF
sly-u.5	101267816	protein PAL OF QUIRKY-like
sly-u.5	101266924	RAF-like serine/threonine-protein kinase PRAF
sot-r.1	102585593	uncharacterized LOC102585593
sot-r.1	102580365	uncharacterized LOC102580365
sot-r.1	102581671	uncharacterized LOC102581671
nta-r.1	107795156	uncharacterized LOC107795156
nta-r.1	107820963	RAF-like serine/threonine-protein kinase 20
nta-r.1	142182041	RAF-like serine/threonine-protein kinase PRAF
osa-u.5	4338858	uncharacterized LOC4338858
osa-u.5	4350431	uncharacterized LOC4350431
osa-u.5	4350433	uncharacterized LOC4350433
zma-u.5	100281824	uncharacterized LOC100281824
zma-u.5	100284710	uncharacterized LOC100284710
tae-r.2	123134220	uncharacterized LOC123134220
tae-r.2	123134228	uncharacterized LOC123134228
tae-r.2	123141512	uncharacterized LOC123141512
hvu-r.1	123402373	uncharacterized LOC123402373
hvu-r.1	123443128	uncharacterized LOC123443128
sbi-r.1	8071849	uncharacterized LOC8071849
sbi-r.1	8077142	uncharacterized LOC8077142
bdi-r.1	100829124	uncharacterized LOC100829124

Top 50 coexpressed genes to 107928669 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107928669 (ghi-r.1 coexpression data)

CoexMap"107928669"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(10797 genes)

IEA

Protein

XP_016715415.2 [sequence] [blastp]
XP_040938971.1 [sequence] [blastp]
XP_040938972.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, chlo_mito 3, mito 3	(predict for XP_016715415.2)
chlo 3, mito 3, chlo_mito 3, nucl 2	(predict for XP_040938971.1)
chlo 3, mito 3, chlo_mito 3, nucl 2	(predict for XP_040938972.1)

Subcellular
localization
TargetP

mito 5, other 4	(predict for XP_016715415.2)
mito 4, other 3	(predict for XP_040938971.1)
mito 4, other 3	(predict for XP_040938972.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107928669	ghi-r.1 for 107909705	ghi-r.1 for 107886545	ghi-r.1 for 107946242	ath-u.5 for AT3G26510	ath-u.5 for AT3G48240	ath-u.5 for AT5G63130	bra-r.6 for 103831599	bra-r.6 for 103873733	bra-r.6 for 103873161	bna-r.1 for BNACNNG09400D	bna-r.1 for 106366184	cit-r.1 for 102620638	cit-r.1 for 102614073	gma-u.5 for 100797123	gma-u.5 for 100810563	vvi-u.5 for 100255423	vvi-u.5 for 100242640	ppo-u.5 for 7453801	ppo-u.5 for 7460752	ppo-u.5 for 7473212	mtr-u.5 for 25493721	mtr-u.5 for 11414328	mtr-u.5 for 11415570	sly-u.5 for 101267605	sly-u.5 for 101267816	sly-u.5 for 101266924	sot-r.1 for 102585593	sot-r.1 for 102580365	sot-r.1 for 102581671	nta-r.1 for 107795156	nta-r.1 for 107820963	nta-r.1 for 142182041	osa-u.5 for 4338858	osa-u.5 for 4350431	osa-u.5 for 4350433	zma-u.5 for 100281824	zma-u.5 for 100284710	tae-r.2 for 123134220	tae-r.2 for 123134228	tae-r.2 for 123141512	hvu-r.1 for 123402373	hvu-r.1 for 123443128	sbi-r.1 for 8071849	sbi-r.1 for 8077142	bdi-r.1 for 100829124

Ortholog

Ortholog ID: 1748

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107928669

uncharacterized LOC107909705

uncharacterized LOC107946242

Octicosapeptide/Phox/Bem1p family protein

octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

uncharacterized LOC103831599

uncharacterized LOC103873161

uncharacterized LOC103837458

uncharacterized BNAA06G32850D

uncharacterized BNAC02G36170D

uncharacterized BNAA02G28090D

uncharacterized LOC102620638

hypothetical protein

uncharacterized LOC100810563

uncharacterized LOC100815157

uncharacterized LOC100815502

protein PAL OF QUIRKY

uncharacterized LOC7453801

uncharacterized LOC7473212

uncharacterized LOC7458054

uncharacterized LOC25493721

uncharacterized LOC11414328

uncharacterized LOC11415570

RAF-like serine/threonine-protein kinase PRAF

protein PAL OF QUIRKY-like

RAF-like serine/threonine-protein kinase PRAF

uncharacterized LOC102585593

uncharacterized LOC102580365

uncharacterized LOC102581671

uncharacterized LOC107795156

RAF-like serine/threonine-protein kinase 20

RAF-like serine/threonine-protein kinase PRAF

uncharacterized LOC4338858

uncharacterized LOC4350431

uncharacterized LOC4350433

uncharacterized LOC100281824

uncharacterized LOC100284710

uncharacterized LOC123134220

uncharacterized LOC123134228

uncharacterized LOC123182102

uncharacterized LOC123402373

uncharacterized LOC123443128

uncharacterized LOC8071849

uncharacterized LOC8077142

uncharacterized LOC100829124

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00250	Alanine, aspartate and glutamate metabolism	4
ghi00260	Glycine, serine and threonine metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi01200	Carbon metabolism	4
ghi01210	2-Oxocarboxylic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00250	Alanine, aspartate and glutamate metabolism	4
ghi00260	Glycine, serine and threonine metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi01200	Carbon metabolism	4
ghi01210	2-Oxocarboxylic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2
ath00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00220	Arginine biosynthesis	2
gma00250	Alanine, aspartate and glutamate metabolism	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma00910	Nitrogen metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00908	Zeatin biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03272	Virion - Hepatitis viruses	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00740	Riboflavin metabolism	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00561	Glycerolipid metabolism	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	6
tae04120	Ubiquitin mediated proteolysis	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00908	Zeatin biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

107928669

107909705

107946242

823982

836433

843401

103831599

103873161

103837458

106349333

106379819

106402326

102620638

102614073

100810563

100815157

100815502

100255423

100242640

7453801

7473212

7458054

25493721

11414328

11415570

101267605

101267816

101266924

102585593

102580365

102581671

107795156

107820963

142182041

4338858

4350431

4350433

100281824

100284710

123134220

123134228

123182102

123402373

123443128

8071849

8077142

100829124

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	2	2	2	2	3	3	3	3	3	3	2	3	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107928669 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107928669 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**