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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100255686   pentatricopeptide repeat-containing protein At1g10270 
 vvi-r.5   100255686   pentatricopeptide repeat-containing protein At1g10270 
 vvi-m.5   100255686   pentatricopeptide repeat-containing protein At1g10270 
 ath-u.5   GRP23   glutamine-rich protein 23 
 gma-u.5   100802924   pentatricopeptide repeat-containing protein At1g10270 
 gma-u.5   100797162   pentatricopeptide repeat-containing protein At1g10270 
 ppo-u.5   18111121   pentatricopeptide repeat-containing protein At1g10270 
 ppo-u.5   18098353   pentatricopeptide repeat-containing protein At1g10270 
 sly-u.5   101259376   pentatricopeptide repeat-containing protein At1g10270 
 osa-u.5   4338555   pentatricopeptide repeat-containing protein At1g10270 
 zma-u.5   100191742   uncharacterized LOC100191742 

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Top 50 coexpressed genes to 100255686 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100255686 (vvi-u.5 coexpression data)

CoexMap"100255686"


vviLOC100255686 | Entrez gene ID : 100255686      
Species vvi ath gma ppo sly osa zma sbi nta mtr cre bra cit hvu bdi sot tae bna ghi
Paralog 3 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (557 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002267973.2 [sequence] [blastp]
XP_019079218.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1  (predict for XP_002267973.2)
chlo 8,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1  (predict for XP_019079218.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_002267973.2)
mito 5  (predict for XP_019079218.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100255686

.
vvi-r.5
for
100255686

.
vvi-m.5
for
100255686

.
ath-u.5
for
GRP23

.
gma-u.5
for
100802924

.
gma-u.5
for
100797162

.
ppo-u.5
for
18111121

.
ppo-u.5
for
18098353

.
sly-u.5
for
101259376

.
osa-u.5
for
4338555

.
zma-u.5
for
100191742

.


Ortholog ID: 5006
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol GRP23 LOC100802924 LOC100797162 LOC101259376 LOC4338555 LOC100191742 LOC103871799 LOC103868110 LOC100255686 LOC18111121 LOC18098353 LOC11412880 LOC123187200 LOC123047187 LOC123424538 LOC123428213 LOC107963159 LOC107931603 LOC106418198 LOC106362408 LOC8068990 LOC8054217 LOC102596557 LOC102625240 LOC100820999 LOC100845268 LOC107771189 LOC107806585
Function* glutamine-rich protein 23 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 uncharacterized LOC100191742 pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00230 Purine metabolism 3
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03083 Polycomb repressive complex 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03083 Polycomb repressive complex 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837566 100802924 100797162 101259376 4338555 100191742 103871799 103868110 100255686 18111121 18098353 11412880 123187200 123047187 123424538 123428213 107963159 107931603 106418198 106362408 8068990 8054217 102596557 102625240 100820999 100845268 107771189 107806585
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